EnhancerDB
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  3. rs116170971[chr1:213090544]
Enhancers that have rs116170971[chr1:213090544]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 213086665 213108095 enh27473
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Ovary Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Uterus Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Stomach
chr1 213090277 213090696 vista5038
VISTA
Transcript factors that have rs116170971[chr1:213090544]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 213090107 213090717 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107869442
chr1 213090114 213090694 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107869445
chr1 213090134 213090654 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107869449
chr1 213090145 213090733 ZNF274 GTRD no Liver (HepG2) 21379271
chr1 213090145 213090733 ZNF274 GTRD no Liver (HepG2) 107869451
chr1 213090158 213090548 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21379273
chr1 213090158 213090548 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107869453
chr1 213090172 213090805 ZNF274 GTRD no Liver (HepG2) 21379274
chr1 213090172 213090805 ZNF274 GTRD no Liver (HepG2) 107869454
chr1 213090184 213090801 ZNF274 GTRD no Bone Marrow (K562) 21379275
chr1 213090184 213090801 ZNF274 GTRD no Bone Marrow (K562) 107869455
chr1 213090195 213090551 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107869456
chr1 213090224 213090560 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107869457
chr1 213090231 213090607 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107869458
chr1 213090235 213090555 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21379276
chr1 213090235 213090555 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107869459
chr1 213090235 213090556 SP1 UCSC Txn Factor no Conserved 107869460
chr1 213090247 213090577 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107869461
chr1 213090256 213090556 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21379277
chr1 213090256 213090556 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107869462
chr1 213090284 213090834 ZNF274 GTRD no Cervix (HeLa-S3) 21379278
chr1 213090284 213090834 ZNF274 GTRD no Cervix (HeLa-S3) 107869464
chr1 213090539 213090549 TBX21 JASPAR yes 35154565
chr1 213090539 213090549 TBX21 JASPAR yes 118455686
chr1 213090539 213090550 TBX20 JASPAR yes 35154566
chr1 213090539 213090550 TBX2 JASPAR yes 35154567
chr1 213090539 213090550 TBX20 JASPAR yes 118455687
chr1 213090539 213090550 TBX2 JASPAR yes 118455688
chr1 213090539 213090552 EOMES JASPAR yes 35154568
chr1 213090539 213090552 EOMES JASPAR yes 118455689
chr1 213090540 213090550 TBR1 JASPAR yes 35154569
chr1 213090540 213090550 TBR1 JASPAR yes 118455690
Genes associated with rs116170971[chr1:213090544], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More