EnhancerDB
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  3. vista50818[chr6:11374452-11374883]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50818[chr6:11374452-11374883]
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Tissue distribution of vista50818
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Transcription factor that possibly regulate vista50818[chr6:11374452-11374883]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 11374501 11375213 NFIC UCSC Txn Factor no Conserved 108538388
chr6 11374501 11375213 NFIC UCSC Txn Factor no Conserved 108538389
chr6 11374515 11374930 RELA UCSC Txn Factor no Conserved 108538390
chr6 11374538 11375248 NFATC1 UCSC Txn Factor no Conserved 108538391
chr6 11374538 11375248 NFATC1 UCSC Txn Factor no Conserved 108538392
chr6 11374551 11374889 ATF2 UCSC Txn Factor no Conserved 108538393
chr6 11374559 11375182 FOXM1 UCSC Txn Factor no Conserved 108538394
chr6 11374559 11375182 FOXM1 UCSC Txn Factor no Conserved 108538395
chr6 11374565 11374885 RUNX3 UCSC Txn Factor no Conserved 108538396
chr6 11374574 11374852 SPI1 UCSC Txn Factor no Conserved 108538397
chr6 11374445 11374456 TBX20 JASPAR yes 70308960
chr6 11374445 11374456 TBX20 JASPAR yes 99881267
chr6 11374455 11374469 IRF7 JASPAR yes 70308961
chr6 11374455 11374469 IRF7 JASPAR yes 99881268
chr6 11374488 11374502 PAX6 JASPAR yes 70308962
chr6 11374488 11374502 PAX6 JASPAR yes 99881269
chr6 11374498 11374516 RARA JASPAR yes 70308963
chr6 11374498 11374516 RARA JASPAR yes 99881270
chr6 11374502 11374505 MYB TRANSFAC yes 70308964
chr6 11374502 11374505 MYB TRANSFAC yes 99881271
chr6 11374518 11374528 SREBF2 JASPAR yes 70308965
chr6 11374518 11374528 SREBF2 JASPAR yes 99881272
chr6 11374526 11374532 SOX10 JASPAR yes 70308966
chr6 11374526 11374532 SOX10 JASPAR yes 99881273
chr6 11374529 11374547 NR3C1 JASPAR yes 70308967
chr6 11374529 11374547 NR3C1 JASPAR yes 99881274
chr6 11374534 11374538 YY1 TRANSFAC yes 70308968
chr6 11374534 11374538 YY1 TRANSFAC yes 99881275
chr6 11374538 11374545 SPI1 JASPAR yes 70308969
chr6 11374538 11374545 SPI1 JASPAR yes 99881276
chr6 11374538 11374546 FEV JASPAR yes 70308970
chr6 11374538 11374546 FEV JASPAR yes 99881277
chr6 11374540 11374545 ETS2 TRANSFAC yes 70308971
chr6 11374540 11374545 ETS2 TRANSFAC yes 99881278
chr6 11374567 11374573 TCF4 TRANSFAC yes 70308972
chr6 11374567 11374573 TCF4 TRANSFAC yes 99881279
chr6 11374572 11374582 ID4 JASPAR yes 70308973
chr6 11374572 11374582 TCF3 JASPAR yes 70308974
chr6 11374572 11374582 TCF4 JASPAR yes 70308975
chr6 11374572 11374582 ID4 JASPAR yes 99881280
chr6 11374572 11374582 TCF3 JASPAR yes 99881281
chr6 11374572 11374582 TCF4 JASPAR yes 99881282
chr6 11374573 11374582 SNAI2 JASPAR yes 70308976
chr6 11374573 11374582 SNAI2 JASPAR yes 99881283
chr6 11374573 11374584 GCM1 JASPAR yes 70308977
chr6 11374573 11374584 GCM1 JASPAR yes 99881284
chr6 11374574 11374579 USF2 TRANSFAC yes 70308978
chr6 11374574 11374579 USF2 TRANSFAC yes 99881285
chr6 11374583 11374598 SCRT1 JASPAR yes 70308979
chr6 11374583 11374598 SCRT1 JASPAR yes 99881286
chr6 11374587 11374596 SNAI2 JASPAR yes 70308980
chr6 11374587 11374596 SNAI2 JASPAR yes 99881287
chr6 11374587 11374597 FIGLA JASPAR yes 70308981
chr6 11374587 11374597 ID4 JASPAR yes 70308982
chr6 11374587 11374597 MSC JASPAR yes 70308983
chr6 11374587 11374597 MYF6 JASPAR yes 70308984
chr6 11374587 11374597 TCF3 JASPAR yes 70308985
chr6 11374587 11374597 TCF4 JASPAR yes 70308986
chr6 11374587 11374597 FIGLA JASPAR yes 99881288
chr6 11374587 11374597 ID4 JASPAR yes 99881289
chr6 11374587 11374597 MSC JASPAR yes 99881290
chr6 11374587 11374597 MYF6 JASPAR yes 99881291
chr6 11374587 11374597 TCF3 JASPAR yes 99881292
chr6 11374587 11374597 TCF4 JASPAR yes 99881293
chr6 11374602 11374617 SOX21 JASPAR yes 70308987
chr6 11374602 11374617 SOX21 JASPAR yes 99881294
chr6 11374602 11374618 SOX4 JASPAR yes 70308988
chr6 11374602 11374618 SOX4 JASPAR yes 99881295
chr6 11374637 11374649 PKNOX2 JASPAR yes 70308989
chr6 11374637 11374649 PKNOX2 JASPAR yes 99881296
chr6 11374646 11374657 GCM1 JASPAR yes 70308990
chr6 11374646 11374657 GCM1 JASPAR yes 99881297
chr6 11374666 11374678 E2F8 JASPAR yes 70308991
chr6 11374666 11374678 E2F8 JASPAR yes 99881298
chr6 11374705 11374726 IRF1 JASPAR yes 70308992
chr6 11374705 11374726 IRF1 JASPAR yes 99881299
chr6 11374707 11374722 PRDM1 JASPAR yes 70308993
chr6 11374707 11374722 PRDM1 JASPAR yes 99881300
chr6 11374708 11374722 STAT1 JASPAR yes 70308994
chr6 11374708 11374722 STAT1 JASPAR yes 99881301
chr6 11374713 11374724 ELK4 JASPAR yes 70308995
chr6 11374713 11374724 FLI1 JASPAR yes 70308996
chr6 11374713 11374724 ELK4 JASPAR yes 99881302
chr6 11374713 11374724 FLI1 JASPAR yes 99881303
chr6 11374714 11374724 ETV6 JASPAR yes 70308997
chr6 11374714 11374724 GABPA JASPAR yes 70308998
chr6 11374714 11374724 ETV6 JASPAR yes 99881304
chr6 11374714 11374724 GABPA JASPAR yes 99881305
chr6 11374714 11374725 ELF5 JASPAR yes 70308999
chr6 11374714 11374725 ELF5 JASPAR yes 99881306
chr6 11374714 11374727 ELF1 JASPAR yes 70309000
chr6 11374714 11374727 ELF1 JASPAR yes 99881307
chr6 11374714 11374728 SPI1 JASPAR yes 70309001
chr6 11374714 11374728 SPI1 JASPAR yes 99881308
chr6 11374715 11374722 SPI1 JASPAR yes 70309002
chr6 11374715 11374722 SPI1 JASPAR yes 99881309
chr6 11374715 11374723 EHF JASPAR yes 70309003
chr6 11374715 11374723 EHF JASPAR yes 99881310
chr6 11374717 11374724 SPIB JASPAR yes 70309004
chr6 11374717 11374724 SPIB JASPAR yes 99881311
chr6 11374727 11374731 YY1 TRANSFAC yes 70309005
chr6 11374727 11374731 YY1 TRANSFAC yes 99881312
chr6 11374727 11374737 NFATC3 JASPAR yes 70309006
chr6 11374727 11374737 NFATC3 JASPAR yes 99881313
chr6 11374753 11374763 SP1 JASPAR yes 70309007
chr6 11374753 11374763 SP1 JASPAR yes 99881314
chr6 11374756 11374761 SP1 TRANSFAC yes 70309008
chr6 11374756 11374761 SP1 TRANSFAC yes 99881315
chr6 11374758 11374763 TFAP2A TRANSFAC yes 70309009
chr6 11374758 11374763 TFAP2A TRANSFAC yes 99881316
chr6 11374758 11374764 MZF1 JASPAR yes 70309010
chr6 11374758 11374764 MZF1 JASPAR yes 99881317
chr6 11374759 11374769 REL JASPAR yes 70309011
chr6 11374759 11374769 REL JASPAR yes 99881318
chr6 11374759 11374770 NFKB1 JASPAR yes 70309012
chr6 11374759 11374770 NFKB1 JASPAR yes 99881319
chr6 11374774 11374784 NFATC3 JASPAR yes 70309013
chr6 11374774 11374784 NFATC3 JASPAR yes 99881320
chr6 11374782 11374796 NR2F1 JASPAR yes 70309014
chr6 11374782 11374796 RXRB JASPAR yes 70309015
chr6 11374782 11374796 RXRG JASPAR yes 70309016
chr6 11374782 11374796 NR2F1 JASPAR yes 99881321
chr6 11374782 11374796 RXRB JASPAR yes 99881322
chr6 11374782 11374796 RXRG JASPAR yes 99881323
chr6 11374790 11374807 RARA JASPAR yes 70309017
chr6 11374790 11374807 RXRA JASPAR yes 70309018
chr6 11374790 11374807 RARA JASPAR yes 99881324
chr6 11374790 11374807 RXRA JASPAR yes 99881325
chr6 11374813 11374825 HNF1B JASPAR yes 70309019
chr6 11374813 11374825 HNF1B JASPAR yes 99881326
chr6 11374817 11374821 YY1 TRANSFAC yes 70309020
chr6 11374817 11374821 YY1 TRANSFAC yes 99881327
chr6 11374824 11374827 MYB TRANSFAC yes 70309021
chr6 11374824 11374827 MYB TRANSFAC yes 99881328
chr6 11374827 11374839 GLI2 JASPAR yes 70309022
chr6 11374827 11374839 GLI2 JASPAR yes 99881329
chr6 11374846 11374858 BHLHE23 JASPAR yes 70309023
chr6 11374846 11374858 BHLHE23 JASPAR yes 99881330
chr6 11374847 11374857 BHLHE22 JASPAR yes 70309024
chr6 11374847 11374857 BHLHE22 JASPAR yes 99881331
chr6 11374872 11374876 TEAD2 TRANSFAC yes 70309025
chr6 11374872 11374876 TEAD2 TRANSFAC yes 99881332
chr6 11374872 11374877 TBP TRANSFAC yes 70309026
chr6 11374872 11374877 TBP TRANSFAC yes 99881333
chr6 11374872 11374878 TFIID TRANSFAC yes 70309027
chr6 11374872 11374878 TFIID TRANSFAC yes 99881334
chr6 11374872 11374886 POU4F1 JASPAR yes 70309028
chr6 11374872 11374886 POU4F1 JASPAR yes 99881335
chr6 11374874 11374880 TBP TRANSFAC yes 70309029
chr6 11374874 11374880 TBP TRANSFAC yes 99881336
SNP sites on vista50818[chr6:11374452-11374883]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 11374555 rs9469018 G A
ATF2 NFATC1 NFIC RELA
8830329
chr6 11374557 rs188235486 C G,T
ATF2 NFATC1 NFIC RELA
8830330
chr6 11374586 rs57932054 G A
ATF2 FOXM1 NFATC1 NFIC RELA RUNX3 SCRT1 SPI1
8830331
chr6 11374654 rs151236346 C G
ATF2 FOXM1 GCM1 NFATC1 NFIC RELA RUNX3 SPI1
8830332
chr6 11374778 rs140445991 G C
ATF2 FOXM1 NFATC1 NFATC3 NFIC RELA RUNX3 SPI1
8830333
chr6 11374813 rs10484452 A G
ATF2 FOXM1 HNF1B NFATC1 NFIC RELA RUNX3 SPI1
8830334
chr6 11374849 rs542543535 G A,T
ATF2 BHLHE22 BHLHE23 FOXM1 NFATC1 NFIC RELA RUNX3 SPI1
8830335
chr6 11374851 rs57574161 A G
ATF2 BHLHE22 BHLHE23 FOXM1 NFATC1 NFIC RELA RUNX3 SPI1
8830336
Genes possibly regulated by vista50818[chr6:11374452-11374883]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 11183531 11382581 - NEDD9 ENSG00000111859.12 11382581 0.89 0.84 6159 92302
Expression level of Genes
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miRNAs possibly regulated by vista50818[chr6:11374452-11374883]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results