EnhancerDB
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  3. vista50822[chr6:11393241-11393536]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50822[chr6:11393241-11393536]
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Tissue distribution of vista50822
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Transcription factor that possibly regulate vista50822[chr6:11393241-11393536]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 11392705 11393659 TCF7L2 UCSC Txn Factor no Conserved 108538407
chr6 11393180 11393676 NFIC UCSC Txn Factor no Conserved 108538408
chr6 11393188 11393644 JUND UCSC Txn Factor no Conserved 108538409
chr6 11393200 11393858 GATA2 UCSC Txn Factor no Conserved 108538410
chr6 11393208 11393644 ELF1 UCSC Txn Factor no Conserved 108538411
chr6 11393226 11393626 EP300 UCSC Txn Factor no Conserved 108538412
chr6 11393238 11393620 MYBL2 UCSC Txn Factor no Conserved 108538413
chr6 11393308 11393544 SP1 UCSC Txn Factor no Conserved 108538414
chr6 11393311 11393604 BHLHE40 UCSC Txn Factor no Conserved 108538415
chr6 11393317 11393559 CEBPB UCSC Txn Factor no Conserved 108538416
chr6 11393340 11393505 RXRA UCSC Txn Factor no Conserved 108538417
chr6 11393231 11393245 IRF8 JASPAR yes 70309191
chr6 11393231 11393245 IRF8 JASPAR yes 99883051
chr6 11393262 11393266 YY1 TRANSFAC yes 70309192
chr6 11393262 11393266 YY1 TRANSFAC yes 99883052
chr6 11393272 11393284 IRF1 JASPAR yes 70309193
chr6 11393272 11393284 IRF1 JASPAR yes 99883053
chr6 11393277 11393281 YY1 TRANSFAC yes 70309194
chr6 11393277 11393281 YY1 TRANSFAC yes 99883054
chr6 11393277 11393291 STAT1 JASPAR yes 70309195
chr6 11393277 11393291 STAT1 JASPAR yes 99883055
chr6 11393294 11393305 FOXC1 JASPAR yes 70309196
chr6 11393294 11393305 FOXC1 JASPAR yes 99883056
chr6 11393315 11393324 SOX9 JASPAR yes 70309197
chr6 11393315 11393324 SOX9 JASPAR yes 99883057
chr6 11393317 11393326 SRY JASPAR yes 70309198
chr6 11393317 11393326 SRY JASPAR yes 99883058
chr6 11393330 11393334 LFA1 TRANSFAC yes 70309199
chr6 11393330 11393334 LFA1 TRANSFAC yes 99883059
chr6 11393365 11393379 GATA2 JASPAR yes 70309200
chr6 11393365 11393379 GATA2 JASPAR yes 99883060
chr6 11393369 11393377 GATA5 JASPAR yes 70309201
chr6 11393369 11393377 GATA5 JASPAR yes 99883061
chr6 11393379 11393392 SMAD2 JASPAR yes 70309202
chr6 11393379 11393392 SMAD2 JASPAR yes 99883062
chr6 11393379 11393393 TLX1 JASPAR yes 70309203
chr6 11393379 11393393 TLX1 JASPAR yes 99883063
chr6 11393380 11393394 TLX1 JASPAR yes 70309204
chr6 11393380 11393394 TLX1 JASPAR yes 99883064
chr6 11393381 11393394 SMAD2 JASPAR yes 70309205
chr6 11393381 11393394 SMAD2 JASPAR yes 99883065
chr6 11393392 11393403 NRL JASPAR yes 70309206
chr6 11393392 11393403 NRL JASPAR yes 99883066
chr6 11393400 11393406 YY1 JASPAR yes 70309207
chr6 11393400 11393406 YY1 JASPAR yes 99883067
chr6 11393405 11393409 NFE TRANSFAC yes 70309208
chr6 11393405 11393409 NFE TRANSFAC yes 99883068
chr6 11393406 11393420 TCF7L2 JASPAR yes 70309209
chr6 11393406 11393420 TCF7L2 JASPAR yes 99883069
chr6 11393410 11393416 TCF1 TRANSFAC yes 70309210
chr6 11393410 11393416 TCF1 TRANSFAC yes 99883070
chr6 11393415 11393427 PKNOX1 JASPAR yes 70309211
chr6 11393415 11393427 PKNOX2 JASPAR yes 70309212
chr6 11393415 11393427 TGIF2 JASPAR yes 70309213
chr6 11393415 11393427 PKNOX1 JASPAR yes 99883071
chr6 11393415 11393427 PKNOX2 JASPAR yes 99883072
chr6 11393415 11393427 TGIF2 JASPAR yes 99883073
chr6 11393424 11393435 ELK4 JASPAR yes 70309214
chr6 11393424 11393435 FLI1 JASPAR yes 70309215
chr6 11393424 11393435 ELK4 JASPAR yes 99883074
chr6 11393424 11393435 FLI1 JASPAR yes 99883075
chr6 11393424 11393437 ELF3 JASPAR yes 70309216
chr6 11393424 11393437 ELF3 JASPAR yes 99883076
chr6 11393425 11393429 YY1 TRANSFAC yes 70309217
chr6 11393425 11393429 YY1 TRANSFAC yes 99883077
chr6 11393425 11393436 ELF5 JASPAR yes 70309218
chr6 11393425 11393436 ELF5 JASPAR yes 99883078
chr6 11393425 11393437 EHF JASPAR yes 70309219
chr6 11393425 11393437 ELF1 JASPAR yes 70309220
chr6 11393425 11393437 ELF4 JASPAR yes 70309221
chr6 11393425 11393437 EHF JASPAR yes 99883079
chr6 11393425 11393437 ELF1 JASPAR yes 99883080
chr6 11393425 11393437 ELF4 JASPAR yes 99883081
chr6 11393425 11393438 ELF1 JASPAR yes 70309222
chr6 11393425 11393438 ELF1 JASPAR yes 99883082
chr6 11393426 11393434 FEV JASPAR yes 70309223
chr6 11393426 11393434 FEV JASPAR yes 99883083
chr6 11393433 11393446 ATF4 JASPAR yes 70309224
chr6 11393433 11393446 ATF4 JASPAR yes 99883084
chr6 11393446 11393464 RARA JASPAR yes 70309225
chr6 11393446 11393464 RARA JASPAR yes 99883085
chr6 11393452 11393465 NR2F1 JASPAR yes 70309226
chr6 11393452 11393465 NR2F1 JASPAR yes 99883086
chr6 11393454 11393468 RXRG JASPAR yes 70309227
chr6 11393454 11393468 RXRG JASPAR yes 99883087
chr6 11393456 11393460 ESR1 TRANSFAC yes 70309228
chr6 11393456 11393460 ESR1 TRANSFAC yes 99883088
chr6 11393494 11393498 ESR1 TRANSFAC yes 70309229
chr6 11393494 11393498 ESR1 TRANSFAC yes 99883089
chr6 11393509 11393530 REST JASPAR yes 70309230
chr6 11393509 11393530 REST JASPAR yes 99883090
chr6 11393510 11393529 REST JASPAR yes 70309231
chr6 11393510 11393529 REST JASPAR yes 99883091
chr6 11393519 11393529 SP1 JASPAR yes 70309232
chr6 11393519 11393529 SP1 JASPAR yes 99883092
chr6 11393520 11393524 LFA1 TRANSFAC yes 70309233
chr6 11393520 11393524 LFA1 TRANSFAC yes 99883093
chr6 11393529 11393544 AR JASPAR yes 70309234
chr6 11393529 11393544 AR JASPAR yes 99883094
SNP sites on vista50822[chr6:11393241-11393536]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 11393379 rs12215894 C T
BHLHE40 CEBPB ELF1 EP300 GATA2 JUND MYBL2 NFIC RXRA SMAD2 SP1 TCF7L2 TLX1
8830540
chr6 11393483 rs72832933 G A
BHLHE40 CEBPB ELF1 EP300 GATA2 JUND MYBL2 NFIC RXRA SP1 TCF7L2
8830541
Genes possibly regulated by vista50822[chr6:11393241-11393536]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 11183531 11382581 - NEDD9 ENSG00000111859.12 11382581 0.89 0.84 6159 89340
Expression level of Genes
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miRNAs possibly regulated by vista50822[chr6:11393241-11393536]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results