EnhancerDB
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  3. rs12215894[chr6:11393379]
Enhancers that have rs12215894[chr6:11393379]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11385065 11401475 enh23024
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Liver Astrocyte Lung Stomach Placenta Lung (PC-9) Muscle (Myoblast) Spleen Heart
chr6 11393241 11393536 vista50822
VISTA
Transcript factors that have rs12215894[chr6:11393379]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11392705 11393659 TCF7L2 UCSC Txn Factor no Conserved 108538407
chr6 11393180 11393676 NFIC UCSC Txn Factor no Conserved 108538408
chr6 11393188 11393644 JUND UCSC Txn Factor no Conserved 108538409
chr6 11393200 11393858 GATA2 UCSC Txn Factor no Conserved 108538410
chr6 11393208 11393644 ELF1 UCSC Txn Factor no Conserved 108538411
chr6 11393226 11393626 EP300 UCSC Txn Factor no Conserved 108538412
chr6 11393238 11393620 MYBL2 UCSC Txn Factor no Conserved 108538413
chr6 11393308 11393544 SP1 UCSC Txn Factor no Conserved 108538414
chr6 11393311 11393604 BHLHE40 UCSC Txn Factor no Conserved 108538415
chr6 11393317 11393559 CEBPB UCSC Txn Factor no Conserved 108538416
chr6 11393340 11393505 RXRA UCSC Txn Factor no Conserved 108538417
chr6 11393365 11393379 GATA2 JASPAR yes 70309200
chr6 11393365 11393379 GATA2 JASPAR yes 99883060
chr6 11393379 11393392 SMAD2 JASPAR yes 70309202
chr6 11393379 11393392 SMAD2 JASPAR yes 99883062
chr6 11393379 11393393 TLX1 JASPAR yes 70309203
chr6 11393379 11393393 TLX1 JASPAR yes 99883063
Genes associated with rs12215894[chr6:11393379], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More