EnhancerDB
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  3. vista50882[chr6:12052115-12052407]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50882[chr6:12052115-12052407]
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Tissue distribution of vista50882
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Transcription factor that possibly regulate vista50882[chr6:12052115-12052407]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 12051998 12052442 NFIC UCSC Txn Factor no Conserved 108538515
chr6 12052021 12052429 RELA UCSC Txn Factor no Conserved 108538516
chr6 12052025 12052410 EP300 UCSC Txn Factor no Conserved 108538517
chr6 12052063 12052414 RUNX3 UCSC Txn Factor no Conserved 108538518
chr6 12052087 12052367 FOXM1 UCSC Txn Factor no Conserved 108538519
chr6 12052115 12052329 BATF UCSC Txn Factor no Conserved 108538520
chr6 12052127 12052291 SPI1 UCSC Txn Factor no Conserved 108538521
chr6 12052145 12052149 TEAD2 TRANSFAC yes 70312145
chr6 12052145 12052149 TEAD2 TRANSFAC yes 99940879
chr6 12052145 12052150 TBP TRANSFAC yes 70312146
chr6 12052145 12052150 TBP TRANSFAC yes 99940880
chr6 12052170 12052176 PEA3 TRANSFAC yes 70312147
chr6 12052170 12052176 PEA3 TRANSFAC yes 99940881
chr6 12052202 12052210 FOXL1 JASPAR yes 70312148
chr6 12052202 12052210 FOXL1 JASPAR yes 99940882
chr6 12052209 12052225 GLIS1 JASPAR yes 70312149
chr6 12052209 12052225 GLIS1 JASPAR yes 99940883
chr6 12052212 12052222 ZNF740 JASPAR yes 70312150
chr6 12052212 12052222 ZNF740 JASPAR yes 99940884
chr6 12052214 12052224 ZNF740 JASPAR yes 70312151
chr6 12052214 12052224 ZNF740 JASPAR yes 99940885
chr6 12052219 12052228 NF-kappaB TRANSFAC yes 70312152
chr6 12052219 12052228 NF-kappaB TRANSFAC yes 99940886
chr6 12052219 12052229 NFKB1 JASPAR yes 70312153
chr6 12052219 12052229 RELA JASPAR yes 70312154
chr6 12052219 12052229 REL JASPAR yes 70312155
chr6 12052219 12052229 NFKB1 JASPAR yes 99940887
chr6 12052219 12052229 RELA JASPAR yes 99940888
chr6 12052219 12052229 REL JASPAR yes 99940889
chr6 12052219 12052230 NFKB1 JASPAR yes 70312156
chr6 12052219 12052230 NFKB1 JASPAR yes 99940890
chr6 12052235 12052240 GATA2 JASPAR yes 70312157
chr6 12052235 12052240 GATA2 JASPAR yes 99940891
chr6 12052247 12052262 RUNX2 JASPAR yes 70312158
chr6 12052247 12052262 RUNX2 JASPAR yes 99940892
chr6 12052251 12052261 RUNX3 JASPAR yes 70312159
chr6 12052251 12052261 RUNX3 JASPAR yes 99940893
chr6 12052262 12052266 H1TF2 TRANSFAC yes 70312160
chr6 12052262 12052266 NFE TRANSFAC yes 70312161
chr6 12052262 12052266 SRF TRANSFAC yes 70312162
chr6 12052262 12052266 H1TF2 TRANSFAC yes 99940894
chr6 12052262 12052266 NFE TRANSFAC yes 99940895
chr6 12052262 12052266 SRF TRANSFAC yes 99940896
chr6 12052269 12052284 LEF1 JASPAR yes 70312163
chr6 12052269 12052284 LEF1 JASPAR yes 99940897
chr6 12052298 12052301 MYB TRANSFAC yes 70312164
chr6 12052298 12052301 MYB TRANSFAC yes 99940898
chr6 12052300 12052311 CEBPA JASPAR yes 70312165
chr6 12052300 12052311 CEBPA JASPAR yes 99940899
chr6 12052305 12052325 TP53 JASPAR yes 70312166
chr6 12052305 12052325 TP53 JASPAR yes 99940900
chr6 12052316 12052328 MEF2A JASPAR yes 70312167
chr6 12052316 12052328 MEF2A JASPAR yes 99940901
chr6 12052352 12052356 YY1 TRANSFAC yes 70312168
chr6 12052352 12052356 YY1 TRANSFAC yes 99940902
SNP sites on vista50882[chr6:12052115-12052407]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 12052217 rs9296246 G C,T
BATF EP300 FOXM1 GLIS1 NFIC RELA RUNX3 SPI1 ZNF740
8835994
chr6 12052261 rs182399688 A C
BATF EP300 FOXM1 NFIC RELA RUNX2 RUNX3 SPI1
8835995
chr6 12052266 rs1475356 A G
BATF EP300 FOXM1 H1TF2 NFE NFIC RELA RUNX3 SPI1 SRF
8835996
chr6 12052290 rs9942538 G A
BATF EP300 FOXM1 NFIC RELA RUNX3 SPI1
8835997
chr6 12052402 rs554860118 A G
EP300 NFIC RELA RUNX3
8835998
Genes possibly regulated by vista50882[chr6:12052115-12052407]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 12008995 12165232 + HIVEP1 ENSG00000095951.12 12008995 0.71 0.99 6162 56880
Expression level of Genes
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miRNAs possibly regulated by vista50882[chr6:12052115-12052407]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results