EnhancerDB
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  3. vista50901[chr6:12288471-12288892]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50901[chr6:12288471-12288892]
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Tissue distribution of vista50901
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Transcription factor that possibly regulate vista50901[chr6:12288471-12288892]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 12288486 12288783 ESR1 UCSC Txn Factor no Conserved 108538530
chr6 12288471 12288486 FOXP1 JASPAR yes 70313176
chr6 12288472 12288478 TBP TRANSFAC yes 70313177
chr6 12288474 12288489 PRDM1 JASPAR yes 70313178
chr6 12288474 12288489 STAT2 JASPAR yes 70313179
chr6 12288485 12288495 MZF1 JASPAR yes 70313180
chr6 12288487 12288500 NFKB1 JASPAR yes 70313181
chr6 12288487 12288500 NFKB2 JASPAR yes 70313182
chr6 12288488 12288499 NFKB1 JASPAR yes 70313183
chr6 12288489 12288499 NFKB1 JASPAR yes 70313184
chr6 12288489 12288500 NFKB1 JASPAR yes 70313185
chr6 12288499 12288505 NFIC JASPAR yes 70313186
chr6 12288509 12288513 YY1 TRANSFAC yes 70313187
chr6 12288528 12288534 ETS1 JASPAR yes 70313188
chr6 12288528 12288534 SPI1 JASPAR yes 70313189
chr6 12288529 12288541 E2F8 JASPAR yes 70313190
chr6 12288533 12288553 RREB1 JASPAR yes 70313191
chr6 12288541 12288551 ZNF740 JASPAR yes 70313192
chr6 12288542 12288552 ZNF740 JASPAR yes 70313193
chr6 12288542 12288554 E2F8 JASPAR yes 70313194
chr6 12288546 12288556 SP1 JASPAR yes 70313195
chr6 12288556 12288567 STAT3 JASPAR yes 70313196
chr6 12288573 12288587 BATF3 JASPAR yes 70313197
chr6 12288574 12288586 JDP2 JASPAR yes 70313198
chr6 12288574 12288589 JUND JASPAR yes 70313199
chr6 12288575 12288588 JUN JASPAR yes 70313200
chr6 12288576 12288583 JUN TRANSFAC yes 70313201
chr6 12288600 12288611 ESRRA JASPAR yes 70313202
chr6 12288615 12288626 E2F6 JASPAR yes 70313203
chr6 12288620 12288638 ESR2 JASPAR yes 70313204
chr6 12288621 12288630 RARB TRANSFAC yes 70313205
chr6 12288621 12288638 ESR1 JASPAR yes 70313206
chr6 12288622 12288637 ESR2 JASPAR yes 70313207
chr6 12288622 12288642 ESR1 JASPAR yes 70313208
chr6 12288623 12288627 ESR1 TRANSFAC yes 70313209
chr6 12288628 12288632 LFA1 TRANSFAC yes 70313210
chr6 12288646 12288657 E2F1 JASPAR yes 70313211
chr6 12288647 12288652 SP1 TRANSFAC yes 70313212
chr6 12288659 12288670 ELK4 JASPAR yes 70313213
chr6 12288659 12288670 FLI1 JASPAR yes 70313214
chr6 12288659 12288672 ELF3 JASPAR yes 70313215
chr6 12288660 12288670 ELK1 JASPAR yes 70313216
chr6 12288660 12288670 ELK3 JASPAR yes 70313217
chr6 12288660 12288670 ERG JASPAR yes 70313218
chr6 12288660 12288670 ETS1 JASPAR yes 70313219
chr6 12288660 12288670 ETV1 JASPAR yes 70313220
chr6 12288660 12288670 ETV5 JASPAR yes 70313221
chr6 12288660 12288670 FLI1 JASPAR yes 70313222
chr6 12288660 12288670 GABPA JASPAR yes 70313223
chr6 12288660 12288671 ELF5 JASPAR yes 70313224
chr6 12288660 12288672 ELF1 JASPAR yes 70313225
chr6 12288660 12288672 ELF4 JASPAR yes 70313226
chr6 12288661 12288670 ELK4 JASPAR yes 70313227
chr6 12288662 12288668 ETS1 JASPAR yes 70313228
chr6 12288662 12288668 SPI1 JASPAR yes 70313229
chr6 12288662 12288672 ELK1 JASPAR yes 70313230
chr6 12288680 12288684 NFE TRANSFAC yes 70313231
chr6 12288700 12288714 PLAG1 JASPAR yes 70313232
chr6 12288705 12288720 TFAP2A JASPAR yes 70313233
chr6 12288705 12288720 TFAP2C JASPAR yes 70313234
chr6 12288708 12288720 TFAP2A JASPAR yes 70313235
chr6 12288708 12288720 TFAP2B JASPAR yes 70313236
chr6 12288708 12288720 TFAP2C JASPAR yes 70313237
chr6 12288708 12288723 TFAP2A JASPAR yes 70313238
chr6 12288708 12288723 TFAP2C JASPAR yes 70313239
chr6 12288709 12288718 TFAP2A JASPAR yes 70313240
chr6 12288710 12288719 TFAP2A JASPAR yes 70313241
chr6 12288749 12288754 SP1 TRANSFAC yes 70313242
chr6 12288762 12288776 EBF1 JASPAR yes 70313243
chr6 12288763 12288778 TFAP2A JASPAR yes 70313244
chr6 12288763 12288778 TFAP2C JASPAR yes 70313245
chr6 12288764 12288773 TFAP2A JASPAR yes 70313246
chr6 12288764 12288775 EBF1 JASPAR yes 70313247
chr6 12288768 12288773 TFAP2A TRANSFAC yes 70313248
chr6 12288768 12288774 MZF1 JASPAR yes 70313249
chr6 12288771 12288776 GATA2 JASPAR yes 70313250
chr6 12288787 12288807 RREB1 JASPAR yes 70313251
chr6 12288789 12288809 RREB1 JASPAR yes 70313252
chr6 12288791 12288811 RREB1 JASPAR yes 70313253
chr6 12288793 12288813 RREB1 JASPAR yes 70313254
chr6 12288794 12288814 RREB1 JASPAR yes 70313255
chr6 12288795 12288810 RUNX2 JASPAR yes 70313256
chr6 12288795 12288815 RREB1 JASPAR yes 70313257
chr6 12288797 12288817 RREB1 JASPAR yes 70313258
chr6 12288799 12288819 RREB1 JASPAR yes 70313259
chr6 12288800 12288820 RREB1 JASPAR yes 70313260
chr6 12288801 12288816 RUNX2 JASPAR yes 70313261
chr6 12288801 12288821 RREB1 JASPAR yes 70313262
chr6 12288803 12288823 RREB1 JASPAR yes 70313263
chr6 12288805 12288825 RREB1 JASPAR yes 70313264
chr6 12288816 12288822 MAZ TRANSFAC yes 70313265
chr6 12288816 12288827 E2F6 JASPAR yes 70313266
chr6 12288832 12288853 ZNF263 JASPAR yes 70313267
chr6 12288844 12288865 ZNF263 JASPAR yes 70313268
chr6 12288855 12288874 PAX5 JASPAR yes 70313269
SNP sites on vista50901[chr6:12288471-12288892]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 12288473 rs34552422 T TA
FOXP1 TBP
8837531
chr6 12288474 rs115842087 A G
FOXP1 PRDM1 STAT2 TBP
8837532
chr6 12288546 rs146988956 G A,C,T
E2F8 ESR1 RREB1 SP1 ZNF740
8837533
chr6 12288595 rs73722759 C G
ESR1
8837534
chr6 12288742 rs375405214 GGAGGCCAGGGGCCCCGGCA G
ESR1
8837535
chr6 12288742 rs71741161 GGAGGCCAGGGGCCCCGGCA G
ESR1
8837536
chr6 12288877 rs535525406 T C no 8837537
Genes possibly regulated by vista50901[chr6:12288471-12288892]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 12290596 12297427 + EDN1 ENSG00000078401.6 12290596 0.91 0.93 6163 98296
Expression level of Genes
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miRNAs possibly regulated by vista50901[chr6:12288471-12288892]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results