EnhancerDB
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  3. vista50905[chr6:12328741-12329205]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50905[chr6:12328741-12329205]
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Tissue distribution of vista50905
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Transcription factor that possibly regulate vista50905[chr6:12328741-12329205]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 12328727 12328741 BATF3 JASPAR yes 70313411
chr6 12328727 12328741 BATF3 JASPAR yes 99961278
chr6 12328737 12328744 TBP TRANSFAC yes 70313412
chr6 12328737 12328744 TFIID TRANSFAC yes 70313413
chr6 12328737 12328744 TBP TRANSFAC yes 99961280
chr6 12328737 12328744 TFIID TRANSFAC yes 99961281
chr6 12328772 12328777 GATA1 TRANSFAC yes 70313414
chr6 12328772 12328777 GATA1 TRANSFAC yes 99961282
chr6 12328782 12328792 TEAD1 JASPAR yes 70313415
chr6 12328782 12328792 TEAD4 JASPAR yes 70313416
chr6 12328782 12328792 TEAD1 JASPAR yes 99961283
chr6 12328782 12328792 TEAD4 JASPAR yes 99961284
chr6 12328805 12328817 E2F8 JASPAR yes 70313417
chr6 12328805 12328817 E2F8 JASPAR yes 99961285
chr6 12328808 12328813 SP1 TRANSFAC yes 70313418
chr6 12328808 12328813 SP1 TRANSFAC yes 99961286
chr6 12328809 12328819 SP1 JASPAR yes 70313419
chr6 12328809 12328819 SP1 JASPAR yes 99961287
chr6 12328853 12328861 HOXA5 JASPAR yes 70313420
chr6 12328853 12328861 HOXA5 JASPAR yes 99961288
chr6 12328854 12328864 EMX1 JASPAR yes 70313421
chr6 12328854 12328864 EMX2 JASPAR yes 70313422
chr6 12328854 12328864 GSX1 JASPAR yes 70313423
chr6 12328854 12328864 HOXB3 JASPAR yes 70313424
chr6 12328854 12328864 LHX2 JASPAR yes 70313425
chr6 12328854 12328864 LHX6 JASPAR yes 70313426
chr6 12328854 12328864 MEOX1 JASPAR yes 70313427
chr6 12328854 12328864 MEOX2 JASPAR yes 70313428
chr6 12328854 12328864 POU6F1 JASPAR yes 70313429
chr6 12328854 12328864 EMX1 JASPAR yes 99961289
chr6 12328854 12328864 EMX2 JASPAR yes 99961290
chr6 12328854 12328864 GSX1 JASPAR yes 99961291
chr6 12328854 12328864 HOXB3 JASPAR yes 99961292
chr6 12328854 12328864 LHX2 JASPAR yes 99961293
chr6 12328854 12328864 LHX6 JASPAR yes 99961294
chr6 12328854 12328864 MEOX1 JASPAR yes 99961295
chr6 12328854 12328864 MEOX2 JASPAR yes 99961296
chr6 12328854 12328864 POU6F1 JASPAR yes 99961297
chr6 12328854 12328867 HNF1B JASPAR yes 70313430
chr6 12328854 12328867 HNF1B JASPAR yes 99961298
chr6 12328855 12328863 LBX1 JASPAR yes 70313431
chr6 12328855 12328863 PDX1 JASPAR yes 70313432
chr6 12328855 12328863 VAX1 JASPAR yes 70313433
chr6 12328855 12328863 VAX2 JASPAR yes 70313434
chr6 12328855 12328863 VSX1 JASPAR yes 70313435
chr6 12328855 12328863 VSX2 JASPAR yes 70313436
chr6 12328855 12328863 LBX1 JASPAR yes 99961299
chr6 12328855 12328863 PDX1 JASPAR yes 99961300
chr6 12328855 12328863 VAX1 JASPAR yes 99961301
chr6 12328855 12328863 VAX2 JASPAR yes 99961302
chr6 12328855 12328863 VSX1 JASPAR yes 99961303
chr6 12328855 12328863 VSX2 JASPAR yes 99961304
chr6 12328861 12328870 NFIX JASPAR yes 70313437
chr6 12328861 12328870 NFIX JASPAR yes 99961305
chr6 12328861 12328871 NFIA JASPAR yes 70313438
chr6 12328861 12328871 NFIA JASPAR yes 99961306
chr6 12328863 12328869 NFIC JASPAR yes 70313439
chr6 12328863 12328869 NFIC JASPAR yes 99961307
chr6 12328885 12328896 FOXA1 JASPAR yes 70313440
chr6 12328885 12328896 FOXA1 JASPAR yes 99961308
chr6 12328885 12328900 FOXA1 JASPAR yes 70313441
chr6 12328885 12328900 FOXA1 JASPAR yes 99961309
chr6 12328902 12328905 MYB TRANSFAC yes 70313442
chr6 12328902 12328905 MYB TRANSFAC yes 99961310
chr6 12328913 12328927 RXRB JASPAR yes 70313443
chr6 12328913 12328927 RXRB JASPAR yes 99961311
chr6 12328913 12328928 NR2C2 JASPAR yes 70313444
chr6 12328913 12328928 NR2C2 JASPAR yes 99961312
chr6 12328914 12328935 ZNF263 JASPAR yes 70313445
chr6 12328914 12328935 ZNF263 JASPAR yes 99961313
chr6 12328933 12328937 H1TF2 TRANSFAC yes 70313446
chr6 12328933 12328937 NFE TRANSFAC yes 70313447
chr6 12328933 12328937 SRF TRANSFAC yes 70313448
chr6 12328933 12328937 H1TF2 TRANSFAC yes 99961314
chr6 12328933 12328937 NFE TRANSFAC yes 99961315
chr6 12328933 12328937 SRF TRANSFAC yes 99961316
chr6 12328961 12328972 PROP1 JASPAR yes 70313449
chr6 12328961 12328972 PROP1 JASPAR yes 99961317
chr6 12328961 12328973 GRHL1 JASPAR yes 70313450
chr6 12328961 12328973 GRHL1 JASPAR yes 99961318
chr6 12328968 12328980 HNF1B JASPAR yes 70313451
chr6 12328968 12328980 HNF1B JASPAR yes 99961319
chr6 12328984 12328993 POU3F4 JASPAR yes 70313452
chr6 12328984 12328993 POU3F4 JASPAR yes 99961320
chr6 12328990 12328999 ZEB1 JASPAR yes 70313453
chr6 12328990 12328999 ZEB1 JASPAR yes 99961321
chr6 12328991 12329001 FIGLA JASPAR yes 70313454
chr6 12328991 12329001 ID4 JASPAR yes 70313455
chr6 12328991 12329001 MSC JASPAR yes 70313456
chr6 12328991 12329001 TCF3 JASPAR yes 70313457
chr6 12328991 12329001 TCF4 JASPAR yes 70313458
chr6 12328991 12329001 FIGLA JASPAR yes 99961322
chr6 12328991 12329001 ID4 JASPAR yes 99961323
chr6 12328991 12329001 MSC JASPAR yes 99961324
chr6 12328991 12329001 TCF3 JASPAR yes 99961325
chr6 12328991 12329001 TCF4 JASPAR yes 99961326
chr6 12328992 12329001 SNAI2 JASPAR yes 70313459
chr6 12328992 12329001 SNAI2 JASPAR yes 99961327
chr6 12328993 12328998 USF2 TRANSFAC yes 70313460
chr6 12328993 12328998 USF2 TRANSFAC yes 99961328
chr6 12329026 12329030 YY1 TRANSFAC yes 70313461
chr6 12329026 12329030 YY1 TRANSFAC yes 99961329
chr6 12329029 12329038 SRY JASPAR yes 70313462
chr6 12329029 12329038 SRY JASPAR yes 99961330
chr6 12329036 12329050 IRF7 JASPAR yes 70313463
chr6 12329036 12329050 IRF7 JASPAR yes 99961331
chr6 12329050 12329070 ESR1 JASPAR yes 70313464
chr6 12329050 12329070 ESR1 JASPAR yes 99961332
chr6 12329056 12329060 ESR1 TRANSFAC yes 70313465
chr6 12329056 12329060 ESR1 TRANSFAC yes 99961333
chr6 12329056 12329069 SCRT2 JASPAR yes 70313466
chr6 12329056 12329069 SCRT2 JASPAR yes 99961334
chr6 12329056 12329071 SCRT1 JASPAR yes 70313467
chr6 12329056 12329071 SCRT1 JASPAR yes 99961335
chr6 12329057 12329065 FOXO3 JASPAR yes 70313468
chr6 12329057 12329065 FOXO3 JASPAR yes 99961336
chr6 12329060 12329078 TP53 JASPAR yes 70313469
chr6 12329060 12329078 TP63 JASPAR yes 70313470
chr6 12329060 12329078 TP73 JASPAR yes 70313471
chr6 12329060 12329078 TP53 JASPAR yes 99961337
chr6 12329060 12329078 TP63 JASPAR yes 99961338
chr6 12329060 12329078 TP73 JASPAR yes 99961339
chr6 12329061 12329076 TP53 JASPAR yes 70313472
chr6 12329061 12329076 TP53 JASPAR yes 99961340
chr6 12329089 12329096 SPIB JASPAR yes 70313473
chr6 12329089 12329096 SPIB JASPAR yes 99961341
chr6 12329095 12329110 JUND JASPAR yes 70313474
chr6 12329095 12329110 JUND JASPAR yes 99961342
chr6 12329097 12329104 JUN TRANSFAC yes 70313475
chr6 12329097 12329104 JUN TRANSFAC yes 99961343
chr6 12329106 12329111 USF2 TRANSFAC yes 70313476
chr6 12329106 12329111 USF2 TRANSFAC yes 99961344
chr6 12329121 12329125 YY1 TRANSFAC yes 70313477
chr6 12329121 12329125 YY1 TRANSFAC yes 99961345
chr6 12329129 12329141 NHLH1 JASPAR yes 70313478
chr6 12329129 12329141 NHLH1 JASPAR yes 99961346
chr6 12329144 12329148 YY1 TRANSFAC yes 70313479
chr6 12329144 12329148 YY1 TRANSFAC yes 99961347
chr6 12329152 12329167 LEF1 JASPAR yes 70313480
chr6 12329152 12329167 LEF1 JASPAR yes 99961348
chr6 12329153 12329167 TCF7L2 JASPAR yes 70313481
chr6 12329153 12329167 TCF7L2 JASPAR yes 99961349
chr6 12329156 12329162 LEF1 TRANSFAC yes 70313482
chr6 12329156 12329162 SOX10 JASPAR yes 70313483
chr6 12329156 12329162 LEF1 TRANSFAC yes 99961350
chr6 12329156 12329162 SOX10 JASPAR yes 99961351
chr6 12329167 12329177 NKX2-3 JASPAR yes 70313484
chr6 12329167 12329177 NKX2-3 JASPAR yes 99961352
chr6 12329168 12329177 NKX2-8 JASPAR yes 70313485
chr6 12329168 12329177 NKX2-8 JASPAR yes 99961353
chr6 12329185 12329193 MGA JASPAR yes 70313486
chr6 12329185 12329193 MGA JASPAR yes 99961354
chr6 12329190 12329210 TP53 JASPAR yes 70313487
chr6 12329190 12329210 TP53 JASPAR yes 99961355
chr6 12329195 12329199 YY1 TRANSFAC yes 70313488
chr6 12329195 12329199 YY1 TRANSFAC yes 99961356
chr6 12329205 12329209 YY1 TRANSFAC yes 70313489
chr6 12329205 12329209 YY1 TRANSFAC yes 99961357
SNP sites on vista50905[chr6:12328741-12329205]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 12328922 rs78980368 C G,T
NR2C2 RXRB ZNF263
8837844
chr6 12329075 rs78180081 T C
TP53 TP63 TP73
8837845
chr6 12329195 rs7750360 G A
TP53 YY1
8837846
Genes possibly regulated by vista50905[chr6:12328741-12329205]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 12290596 12297427 + EDN1 ENSG00000078401.6 12290596 0.91 0.93 6163 61855
Expression level of Genes
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miRNAs possibly regulated by vista50905[chr6:12328741-12329205]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results