EnhancerDB
  1. Home
  2. SNP
  3. rs78980368[chr6:12328922]
Enhancers that have rs78980368[chr6:12328922]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12317105 12339155 enh23034
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Blood (GM12878) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
chr6 12328741 12329205 vista50905
VISTA
Transcript factors that have rs78980368[chr6:12328922]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12328913 12328927 RXRB JASPAR yes 70313443
chr6 12328913 12328927 RXRB JASPAR yes 99961311
chr6 12328913 12328928 NR2C2 JASPAR yes 70313444
chr6 12328913 12328928 NR2C2 JASPAR yes 99961312
chr6 12328914 12328935 ZNF263 JASPAR yes 70313445
chr6 12328914 12328935 ZNF263 JASPAR yes 99961313
Genes associated with rs78980368[chr6:12328922], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More