EnhancerDB
  1. Home
  2. Enhancers
  3. vista50907[chr6:12343376-12343753]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50907[chr6:12343376-12343753]
Back to top
Tissue distribution of vista50907
Back to top
Transcription factor that possibly regulate vista50907[chr6:12343376-12343753]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 12343445 12344467 EP300 UCSC Txn Factor no Conserved 108538543
chr6 12343491 12343807 EBF1 UCSC Txn Factor no Conserved 108538544
chr6 12343499 12344451 TCF12 UCSC Txn Factor no Conserved 108538545
chr6 12343511 12343802 STAT3 UCSC Txn Factor no Conserved 108538546
chr6 12343369 12343380 E2F6 JASPAR yes 70313525
chr6 12343369 12343380 E2F6 JASPAR yes 99963250
chr6 12343381 12343386 GATA2 JASPAR yes 70313526
chr6 12343381 12343386 GATA2 JASPAR yes 99963251
chr6 12343384 12343387 MYB TRANSFAC yes 70313527
chr6 12343384 12343387 MYB TRANSFAC yes 99963252
chr6 12343386 12343392 SOX10 JASPAR yes 70313528
chr6 12343386 12343392 SOX10 JASPAR yes 99963253
chr6 12343392 12343400 FOXO3 JASPAR yes 70313529
chr6 12343392 12343400 FOXO3 JASPAR yes 99963254
chr6 12343414 12343427 SCRT2 JASPAR yes 70313530
chr6 12343414 12343427 SCRT2 JASPAR yes 99963255
chr6 12343430 12343450 PPARG JASPAR yes 70313531
chr6 12343430 12343450 PPARG JASPAR yes 99963256
chr6 12343466 12343485 REST JASPAR yes 70313532
chr6 12343466 12343485 REST JASPAR yes 99963257
chr6 12343476 12343490 STAT1 JASPAR yes 70313533
chr6 12343476 12343490 STAT1 JASPAR yes 99963258
chr6 12343496 12343500 YY1 TRANSFAC yes 70313534
chr6 12343496 12343500 YY1 TRANSFAC yes 99963259
chr6 12343519 12343533 POU4F1 JASPAR yes 70313535
chr6 12343519 12343533 POU4F1 JASPAR yes 99963260
chr6 12343519 12343535 POU4F2 JASPAR yes 70313536
chr6 12343519 12343535 POU4F3 JASPAR yes 70313537
chr6 12343519 12343535 POU4F2 JASPAR yes 99963261
chr6 12343519 12343535 POU4F3 JASPAR yes 99963262
chr6 12343522 12343526 YY1 TRANSFAC yes 70313538
chr6 12343522 12343526 YY1 TRANSFAC yes 99963263
chr6 12343525 12343539 JUN JASPAR yes 70313539
chr6 12343525 12343539 JUN JASPAR yes 99963264
chr6 12343527 12343538 BATF JASPAR yes 70313540
chr6 12343527 12343538 BATF JASPAR yes 99963265
chr6 12343529 12343540 FOS JASPAR yes 70313541
chr6 12343529 12343540 JUND JASPAR yes 70313542
chr6 12343529 12343540 FOS JASPAR yes 99963266
chr6 12343529 12343540 JUND JASPAR yes 99963267
chr6 12343531 12343537 JUN TRANSFAC yes 70313543
chr6 12343531 12343537 JUN TRANSFAC yes 99963268
chr6 12343543 12343547 NFE TRANSFAC yes 70313544
chr6 12343543 12343547 NFE TRANSFAC yes 99963269
chr6 12343551 12343554 MYB TRANSFAC yes 70313545
chr6 12343551 12343554 MYB TRANSFAC yes 99963270
chr6 12343571 12343579 FOXL1 JASPAR yes 70313546
chr6 12343571 12343579 FOXL1 JASPAR yes 99963271
chr6 12343618 12343622 YY1 TRANSFAC yes 70313547
chr6 12343618 12343622 YY1 TRANSFAC yes 99963272
chr6 12343619 12343630 FOXA1 JASPAR yes 70313548
chr6 12343619 12343630 FOXA1 JASPAR yes 99963273
chr6 12343619 12343634 FOXA1 JASPAR yes 70313549
chr6 12343619 12343634 FOXA1 JASPAR yes 99963274
chr6 12343624 12343638 SPI1 JASPAR yes 70313550
chr6 12343624 12343638 SPI1 JASPAR yes 99963275
chr6 12343626 12343639 ELF3 JASPAR yes 70313551
chr6 12343626 12343639 ELF3 JASPAR yes 99963276
chr6 12343626 12343647 IRF1 JASPAR yes 70313552
chr6 12343626 12343647 IRF1 JASPAR yes 99963277
chr6 12343630 12343635 ETS2 TRANSFAC yes 70313553
chr6 12343630 12343635 ETS2 TRANSFAC yes 99963278
chr6 12343630 12343644 STAT1 JASPAR yes 70313554
chr6 12343630 12343644 STAT1 JASPAR yes 99963279
chr6 12343635 12343646 NFE2L2 JASPAR yes 70313555
chr6 12343635 12343646 NFE2L2 JASPAR yes 99963280
chr6 12343635 12343648 SMAD2 JASPAR yes 70313556
chr6 12343635 12343648 SMAD2 JASPAR yes 99963281
chr6 12343649 12343653 YY1 TRANSFAC yes 70313557
chr6 12343649 12343653 YY1 TRANSFAC yes 99963282
chr6 12343651 12343665 EBF1 JASPAR yes 70313558
chr6 12343651 12343665 EBF1 JASPAR yes 99963283
chr6 12343652 12343663 EBF1 JASPAR yes 70313559
chr6 12343652 12343663 EBF1 JASPAR yes 99963284
chr6 12343653 12343664 EBF1 JASPAR yes 70313560
chr6 12343653 12343664 EBF1 JASPAR yes 99963285
chr6 12343658 12343668 RELA JASPAR yes 70313561
chr6 12343658 12343668 REL JASPAR yes 70313562
chr6 12343658 12343668 RELA JASPAR yes 99963286
chr6 12343658 12343668 REL JASPAR yes 99963287
chr6 12343658 12343669 NFKB1 JASPAR yes 70313563
chr6 12343658 12343669 NFKB1 JASPAR yes 99963288
chr6 12343659 12343669 NFKB1 JASPAR yes 70313564
chr6 12343659 12343669 NFKB1 JASPAR yes 99963289
chr6 12343699 12343705 TBP TRANSFAC yes 70313565
chr6 12343699 12343705 TBP TRANSFAC yes 99963290
chr6 12343711 12343722 JUND JASPAR yes 70313566
chr6 12343711 12343722 JUND JASPAR yes 99963291
chr6 12343732 12343744 POU3F2 JASPAR yes 70313567
chr6 12343732 12343744 POU3F2 JASPAR yes 99963292
chr6 12343751 12343754 MYB TRANSFAC yes 70313568
chr6 12343751 12343754 MYB TRANSFAC yes 99963293
SNP sites on vista50907[chr6:12343376-12343753]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 12343403 rs151219848 C T no 8838025
chr6 12343476 rs77239935 C T
EP300 REST STAT1
8838026
chr6 12343614 rs189035840 G A
EBF1 EP300 STAT3 TCF12
8838027
Genes possibly regulated by vista50907[chr6:12343376-12343753]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 12290596 12297427 + EDN1 ENSG00000078401.6 12290596 0.91 0.93 6163 47220
Expression level of Genes
Back to top
miRNAs possibly regulated by vista50907[chr6:12343376-12343753]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results