EnhancerDB
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  3. rs77239935[chr6:12343476]
Enhancers that have rs77239935[chr6:12343476]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12340945 12361575 enh38802
Astrocyte Colon (HCT116) Pancreas Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
chr6 12343376 12343753 vista50907
VISTA
Transcript factors that have rs77239935[chr6:12343476]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12343445 12344467 EP300 UCSC Txn Factor no Conserved 108538543
chr6 12343466 12343485 REST JASPAR yes 70313532
chr6 12343466 12343485 REST JASPAR yes 99963257
chr6 12343476 12343490 STAT1 JASPAR yes 70313533
chr6 12343476 12343490 STAT1 JASPAR yes 99963258
Genes associated with rs77239935[chr6:12343476], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More