EnhancerDB
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  3. vista50954[chr6:13404217-13404579]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista50954[chr6:13404217-13404579]
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Tissue distribution of vista50954
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Transcription factor that possibly regulate vista50954[chr6:13404217-13404579]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 13404209 13404223 E2F7 JASPAR yes 70315788
chr6 13404209 13404223 E2F7 JASPAR yes 100026348
chr6 13404210 13404222 E2F8 JASPAR yes 70315789
chr6 13404210 13404222 E2F8 JASPAR yes 100026349
chr6 13404211 13404217 NFIC JASPAR yes 70315790
chr6 13404211 13404217 NFIC JASPAR yes 100026350
chr6 13404221 13404235 SPI1 JASPAR yes 70315791
chr6 13404221 13404235 SPI1 JASPAR yes 100026351
chr6 13404227 13404232 ETS2 TRANSFAC yes 70315792
chr6 13404227 13404232 ETS2 TRANSFAC yes 100026352
chr6 13404236 13404252 POU4F3 JASPAR yes 70315793
chr6 13404236 13404252 POU4F3 JASPAR yes 100026353
chr6 13404238 13404252 POU4F1 JASPAR yes 70315794
chr6 13404238 13404252 POU4F1 JASPAR yes 100026354
chr6 13404243 13404255 MEF2B JASPAR yes 70315795
chr6 13404243 13404255 MEF2B JASPAR yes 100026355
chr6 13404255 13404271 SOX8 JASPAR yes 70315796
chr6 13404255 13404271 SOX8 JASPAR yes 100026356
chr6 13404263 13404278 FOXA1 JASPAR yes 70315797
chr6 13404263 13404278 FOXA1 JASPAR yes 100026357
chr6 13404264 13404276 FOXI1 JASPAR yes 70315798
chr6 13404264 13404276 FOXI1 JASPAR yes 100026358
chr6 13404265 13404277 FOXC2 JASPAR yes 70315799
chr6 13404265 13404277 FOXC2 JASPAR yes 100026359
chr6 13404266 13404274 FOXG1 JASPAR yes 70315800
chr6 13404266 13404274 FOXG1 JASPAR yes 100026360
chr6 13404266 13404277 FOXB1 JASPAR yes 70315801
chr6 13404266 13404277 FOXC1 JASPAR yes 70315802
chr6 13404266 13404277 FOXB1 JASPAR yes 100026361
chr6 13404266 13404277 FOXC1 JASPAR yes 100026362
chr6 13404267 13404278 FOXA1 JASPAR yes 70315803
chr6 13404267 13404278 FOXA1 JASPAR yes 100026363
chr6 13404271 13404286 MEF2A JASPAR yes 70315804
chr6 13404271 13404286 MEF2A JASPAR yes 100026364
chr6 13404272 13404287 MEF2C JASPAR yes 70315805
chr6 13404272 13404287 MEF2C JASPAR yes 100026365
chr6 13404273 13404285 MEF2A JASPAR yes 70315806
chr6 13404273 13404285 MEF2A JASPAR yes 100026366
chr6 13404274 13404284 MEF2A JASPAR yes 70315807
chr6 13404274 13404284 MEF2A JASPAR yes 100026367
chr6 13404275 13404279 YY1 TRANSFAC yes 70315808
chr6 13404275 13404279 YY1 TRANSFAC yes 100026368
chr6 13404285 13404300 HNF1A JASPAR yes 70315809
chr6 13404285 13404300 HNF1A JASPAR yes 100026369
chr6 13404286 13404298 HNF1B JASPAR yes 70315810
chr6 13404286 13404298 HNF1B JASPAR yes 100026370
chr6 13404286 13404299 HNF1B JASPAR yes 70315811
chr6 13404286 13404299 HNF1B JASPAR yes 100026371
chr6 13404289 13404303 FOXF2 JASPAR yes 70315812
chr6 13404289 13404303 FOXF2 JASPAR yes 100026372
chr6 13404289 13404304 FOXP1 JASPAR yes 70315813
chr6 13404289 13404304 FOXP1 JASPAR yes 100026373
chr6 13404290 13404301 FOXA1 JASPAR yes 70315814
chr6 13404290 13404301 FOXA1 JASPAR yes 100026374
chr6 13404290 13404305 FOXA1 JASPAR yes 70315815
chr6 13404290 13404305 FOXA1 JASPAR yes 100026375
chr6 13404291 13404302 FOXB1 JASPAR yes 70315816
chr6 13404291 13404302 FOXC1 JASPAR yes 70315817
chr6 13404291 13404302 FOXB1 JASPAR yes 100026376
chr6 13404291 13404302 FOXC1 JASPAR yes 100026377
chr6 13404291 13404303 FOXC2 JASPAR yes 70315818
chr6 13404291 13404303 FOXC2 JASPAR yes 100026378
chr6 13404292 13404303 FOXP2 JASPAR yes 70315819
chr6 13404292 13404303 FOXP2 JASPAR yes 100026379
chr6 13404294 13404301 FOXD2 JASPAR yes 70315820
chr6 13404294 13404301 FOXI1 JASPAR yes 70315821
chr6 13404294 13404301 FOXL1 JASPAR yes 70315822
chr6 13404294 13404301 FOXO4 JASPAR yes 70315823
chr6 13404294 13404301 FOXO6 JASPAR yes 70315824
chr6 13404294 13404301 FOXP3 JASPAR yes 70315825
chr6 13404294 13404301 FOXD2 JASPAR yes 100026380
chr6 13404294 13404301 FOXI1 JASPAR yes 100026381
chr6 13404294 13404301 FOXL1 JASPAR yes 100026382
chr6 13404294 13404301 FOXO4 JASPAR yes 100026383
chr6 13404294 13404301 FOXO6 JASPAR yes 100026384
chr6 13404294 13404301 FOXP3 JASPAR yes 100026385
chr6 13404294 13404302 FOXD1 JASPAR yes 70315826
chr6 13404294 13404302 FOXG1 JASPAR yes 70315827
chr6 13404294 13404302 FOXO3 JASPAR yes 70315828
chr6 13404294 13404302 FOXD1 JASPAR yes 100026386
chr6 13404294 13404302 FOXG1 JASPAR yes 100026387
chr6 13404294 13404302 FOXO3 JASPAR yes 100026388
chr6 13404312 13404325 POU3F3 JASPAR yes 70315829
chr6 13404312 13404325 POU3F3 JASPAR yes 100026389
chr6 13404317 13404332 MEF2A JASPAR yes 70315830
chr6 13404317 13404332 MEF2A JASPAR yes 100026390
chr6 13404319 13404331 MEF2A JASPAR yes 70315831
chr6 13404319 13404331 MEF2A JASPAR yes 100026391
chr6 13404320 13404330 MEF2A JASPAR yes 70315832
chr6 13404320 13404330 MEF2A JASPAR yes 100026392
chr6 13404320 13404336 POU4F2 JASPAR yes 70315833
chr6 13404320 13404336 POU4F2 JASPAR yes 100026393
chr6 13404345 13404349 YY1 TRANSFAC yes 70315834
chr6 13404345 13404349 YY1 TRANSFAC yes 100026394
chr6 13404363 13404377 ONECUT3 JASPAR yes 70315835
chr6 13404363 13404377 ONECUT3 JASPAR yes 100026395
chr6 13404364 13404375 FOXB1 JASPAR yes 70315836
chr6 13404364 13404375 FOXB1 JASPAR yes 100026396
chr6 13404371 13404375 NFE TRANSFAC yes 70315837
chr6 13404371 13404375 NFE TRANSFAC yes 100026397
chr6 13404375 13404379 YY1 TRANSFAC yes 70315838
chr6 13404375 13404379 YY1 TRANSFAC yes 100026398
chr6 13404393 13404408 STAT1 JASPAR yes 70315839
chr6 13404393 13404408 STAT1 JASPAR yes 100026399
chr6 13404394 13404402 HOXA5 JASPAR yes 70315840
chr6 13404394 13404402 HOXA5 JASPAR yes 100026400
chr6 13404395 13404406 STAT1 JASPAR yes 70315841
chr6 13404395 13404406 STAT1 JASPAR yes 100026401
chr6 13404400 13404407 NFATC2 JASPAR yes 70315842
chr6 13404400 13404407 NFATC2 JASPAR yes 100026402
chr6 13404429 13404434 TFAP2A TRANSFAC yes 70315843
chr6 13404429 13404434 TFAP2A TRANSFAC yes 100026403
chr6 13404429 13404435 MZF1 JASPAR yes 70315844
chr6 13404429 13404435 MZF1 JASPAR yes 100026404
chr6 13404435 13404445 BARHL2 JASPAR yes 70315845
chr6 13404435 13404445 BARHL2 JASPAR yes 100026405
chr6 13404436 13404448 SRF JASPAR yes 70315846
chr6 13404436 13404448 SRF JASPAR yes 100026406
chr6 13404437 13404441 YY1 TRANSFAC yes 70315847
chr6 13404437 13404441 YY1 TRANSFAC yes 100026407
chr6 13404446 13404460 EBF1 JASPAR yes 70315848
chr6 13404446 13404460 EBF1 JASPAR yes 100026408
chr6 13404455 13404459 H4TF2 TRANSFAC yes 70315849
chr6 13404455 13404459 H4TF2 TRANSFAC yes 100026409
chr6 13404488 13404501 ELF1 JASPAR yes 70315850
chr6 13404488 13404501 ELF1 JASPAR yes 100026410
chr6 13404489 13404501 EHF JASPAR yes 70315851
chr6 13404489 13404501 ELF1 JASPAR yes 70315852
chr6 13404489 13404501 ELF4 JASPAR yes 70315853
chr6 13404489 13404501 EHF JASPAR yes 100026411
chr6 13404489 13404501 ELF1 JASPAR yes 100026412
chr6 13404489 13404501 ELF4 JASPAR yes 100026413
chr6 13404489 13404502 ELF3 JASPAR yes 70315854
chr6 13404489 13404502 ELF3 JASPAR yes 100026414
chr6 13404490 13404501 ELF5 JASPAR yes 70315855
chr6 13404490 13404501 ELF5 JASPAR yes 100026415
chr6 13404491 13404498 ETS1 TRANSFAC yes 70315856
chr6 13404491 13404498 ETS1 TRANSFAC yes 100026416
chr6 13404491 13404502 ELK4 JASPAR yes 70315857
chr6 13404491 13404502 ELK4 JASPAR yes 100026417
chr6 13404492 13404500 EHF JASPAR yes 70315858
chr6 13404492 13404500 FEV JASPAR yes 70315859
chr6 13404492 13404500 EHF JASPAR yes 100026418
chr6 13404492 13404500 FEV JASPAR yes 100026419
chr6 13404493 13404500 SPI1 JASPAR yes 70315860
chr6 13404493 13404500 SPI1 JASPAR yes 100026420
chr6 13404496 13404511 ESR2 JASPAR yes 70315861
chr6 13404496 13404511 ESR2 JASPAR yes 100026421
chr6 13404501 13404507 SOX10 JASPAR yes 70315862
chr6 13404501 13404507 SOX10 JASPAR yes 100026422
chr6 13404514 13404530 POU4F2 JASPAR yes 70315863
chr6 13404514 13404530 POU4F2 JASPAR yes 100026423
chr6 13404527 13404531 YY1 TRANSFAC yes 70315864
chr6 13404527 13404531 YY1 TRANSFAC yes 100026424
chr6 13404540 13404555 STAT1 JASPAR yes 70315865
chr6 13404540 13404555 STAT1 JASPAR yes 100026425
chr6 13404542 13404553 STAT1 JASPAR yes 70315866
chr6 13404542 13404553 STAT1 JASPAR yes 100026426
chr6 13404560 13404579 PAX5 JASPAR yes 70315867
chr6 13404560 13404579 PAX5 JASPAR yes 100026427
chr6 13404563 13404580 PAX9 JASPAR yes 70315868
chr6 13404563 13404580 PAX9 JASPAR yes 100026428
chr6 13404569 13404582 ELF1 JASPAR yes 70315869
chr6 13404569 13404582 ELF1 JASPAR yes 100026429
chr6 13404572 13404579 ETS1 TRANSFAC yes 70315870
chr6 13404572 13404579 ETS1 TRANSFAC yes 100026430
chr6 13404572 13404582 GABPA JASPAR yes 70315871
chr6 13404572 13404582 GABPA JASPAR yes 100026431
SNP sites on vista50954[chr6:13404217-13404579]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 13404269 rs77503590 G A
FOXA1 FOXB1 FOXC1 FOXC2 FOXG1 FOXI1 SOX8
8844003
chr6 13404277 rs528000545 AT A
FOXA1 FOXB1 FOXC1 FOXC2 MEF2A MEF2C YY1
8844004
chr6 13404303 rs55657318 C T
FOXA1 FOXC2 FOXF2 FOXP1 FOXP2
8844005
chr6 13404323 rs374428039 A G
MEF2A POU3F3 POU4F2
8844006
chr6 13404564 rs143574670 T C
PAX5 PAX9
8844007
Genes possibly regulated by vista50954[chr6:13404217-13404579]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 13266774 13328815 - TBC1D7 ENSG00000145979.13 13328815 0.85 0.99 6165 24598
chr6 13358062 13487894 - GFOD1 ENSG00000145990.6 13487894 0.75 0.98 6166 16685
chr6 13469513 13486415 - AL583828.1 ENSG00000187461.5 13486415 1.0 0.91 6167 18164
Expression level of Genes
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miRNAs possibly regulated by vista50954[chr6:13404217-13404579]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results