EnhancerDB
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  3. rs528000545[chr6:13404277]
Enhancers that have rs528000545[chr6:13404277]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13393585 13416889 enh8961
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 13404217 13404579 vista50954
VISTA
Transcript factors that have rs528000545[chr6:13404277]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13404263 13404278 FOXA1 JASPAR yes 70315797
chr6 13404263 13404278 FOXA1 JASPAR yes 100026357
chr6 13404265 13404277 FOXC2 JASPAR yes 70315799
chr6 13404265 13404277 FOXC2 JASPAR yes 100026359
chr6 13404266 13404277 FOXB1 JASPAR yes 70315801
chr6 13404266 13404277 FOXC1 JASPAR yes 70315802
chr6 13404266 13404277 FOXB1 JASPAR yes 100026361
chr6 13404266 13404277 FOXC1 JASPAR yes 100026362
chr6 13404267 13404278 FOXA1 JASPAR yes 70315803
chr6 13404267 13404278 FOXA1 JASPAR yes 100026363
chr6 13404271 13404286 MEF2A JASPAR yes 70315804
chr6 13404271 13404286 MEF2A JASPAR yes 100026364
chr6 13404272 13404287 MEF2C JASPAR yes 70315805
chr6 13404272 13404287 MEF2C JASPAR yes 100026365
chr6 13404273 13404285 MEF2A JASPAR yes 70315806
chr6 13404273 13404285 MEF2A JASPAR yes 100026366
chr6 13404274 13404284 MEF2A JASPAR yes 70315807
chr6 13404274 13404284 MEF2A JASPAR yes 100026367
chr6 13404275 13404279 YY1 TRANSFAC yes 70315808
chr6 13404275 13404279 YY1 TRANSFAC yes 100026368
Genes associated with rs528000545[chr6:13404277], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More