EnhancerDB
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  3. vista51190[chr6:17447404-17447614]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51190[chr6:17447404-17447614]
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Tissue distribution of vista51190
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Transcription factor that possibly regulate vista51190[chr6:17447404-17447614]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 17447398 17447408 POU6F2 JASPAR yes 70327725
chr6 17447398 17447408 POU6F2 JASPAR yes 100379591
chr6 17447399 17447409 ALX3 JASPAR yes 70327726
chr6 17447399 17447409 EMX1 JASPAR yes 70327727
chr6 17447399 17447409 EMX2 JASPAR yes 70327728
chr6 17447399 17447409 ESX1 JASPAR yes 70327729
chr6 17447399 17447409 GBX2 JASPAR yes 70327730
chr6 17447399 17447409 GSX1 JASPAR yes 70327731
chr6 17447399 17447409 GSX2 JASPAR yes 70327732
chr6 17447399 17447409 HESX1 JASPAR yes 70327733
chr6 17447399 17447409 HOXB2 JASPAR yes 70327734
chr6 17447399 17447409 HOXB3 JASPAR yes 70327735
chr6 17447399 17447409 LBX2 JASPAR yes 70327736
chr6 17447399 17447409 LHX2 JASPAR yes 70327737
chr6 17447399 17447409 LHX6 JASPAR yes 70327738
chr6 17447399 17447409 MEOX1 JASPAR yes 70327739
chr6 17447399 17447409 MEOX2 JASPAR yes 70327740
chr6 17447399 17447409 MIXL1 JASPAR yes 70327741
chr6 17447399 17447409 MNX1 JASPAR yes 70327742
chr6 17447399 17447409 NOTO JASPAR yes 70327743
chr6 17447399 17447409 RAX JASPAR yes 70327744
chr6 17447399 17447409 ALX3 JASPAR yes 100379592
chr6 17447399 17447409 EMX1 JASPAR yes 100379593
chr6 17447399 17447409 EMX2 JASPAR yes 100379594
chr6 17447399 17447409 ESX1 JASPAR yes 100379595
chr6 17447399 17447409 GBX2 JASPAR yes 100379596
chr6 17447399 17447409 GSX1 JASPAR yes 100379597
chr6 17447399 17447409 GSX2 JASPAR yes 100379598
chr6 17447399 17447409 HESX1 JASPAR yes 100379599
chr6 17447399 17447409 HOXB2 JASPAR yes 100379600
chr6 17447399 17447409 HOXB3 JASPAR yes 100379601
chr6 17447399 17447409 LBX2 JASPAR yes 100379602
chr6 17447399 17447409 LHX2 JASPAR yes 100379603
chr6 17447399 17447409 LHX6 JASPAR yes 100379604
chr6 17447399 17447409 MEOX1 JASPAR yes 100379605
chr6 17447399 17447409 MEOX2 JASPAR yes 100379606
chr6 17447399 17447409 MIXL1 JASPAR yes 100379607
chr6 17447399 17447409 MNX1 JASPAR yes 100379608
chr6 17447399 17447409 NOTO JASPAR yes 100379609
chr6 17447399 17447409 RAX JASPAR yes 100379610
chr6 17447399 17447410 HOXA10 JASPAR yes 70327745
chr6 17447399 17447410 HOXA10 JASPAR yes 100379611
chr6 17447400 17447408 BSX JASPAR yes 70327746
chr6 17447400 17447408 DLX6 JASPAR yes 70327747
chr6 17447400 17447408 EN1 JASPAR yes 70327748
chr6 17447400 17447408 ISX JASPAR yes 70327749
chr6 17447400 17447408 LBX1 JASPAR yes 70327750
chr6 17447400 17447408 LHX9 JASPAR yes 70327751
chr6 17447400 17447408 LMX1A JASPAR yes 70327752
chr6 17447400 17447408 LMX1B JASPAR yes 70327753
chr6 17447400 17447408 NKX6-1 JASPAR yes 70327754
chr6 17447400 17447408 NKX6-2 JASPAR yes 70327755
chr6 17447400 17447408 PAX4 JASPAR yes 70327756
chr6 17447400 17447408 PDX1 JASPAR yes 70327757
chr6 17447400 17447408 PRRX1 JASPAR yes 70327758
chr6 17447400 17447408 RAX2 JASPAR yes 70327759
chr6 17447400 17447408 SHOX JASPAR yes 70327760
chr6 17447400 17447408 UNCX JASPAR yes 70327761
chr6 17447400 17447408 VAX1 JASPAR yes 70327762
chr6 17447400 17447408 VAX2 JASPAR yes 70327763
chr6 17447400 17447408 VSX1 JASPAR yes 70327764
chr6 17447400 17447408 VSX2 JASPAR yes 70327765
chr6 17447400 17447408 BSX JASPAR yes 100379612
chr6 17447400 17447408 DLX6 JASPAR yes 100379613
chr6 17447400 17447408 EN1 JASPAR yes 100379614
chr6 17447400 17447408 ISX JASPAR yes 100379615
chr6 17447400 17447408 LBX1 JASPAR yes 100379616
chr6 17447400 17447408 LHX9 JASPAR yes 100379617
chr6 17447400 17447408 LMX1A JASPAR yes 100379618
chr6 17447400 17447408 LMX1B JASPAR yes 100379619
chr6 17447400 17447408 NKX6-1 JASPAR yes 100379620
chr6 17447400 17447408 NKX6-2 JASPAR yes 100379621
chr6 17447400 17447408 PAX4 JASPAR yes 100379622
chr6 17447400 17447408 PDX1 JASPAR yes 100379623
chr6 17447400 17447408 PRRX1 JASPAR yes 100379624
chr6 17447400 17447408 RAX2 JASPAR yes 100379625
chr6 17447400 17447408 SHOX JASPAR yes 100379626
chr6 17447400 17447408 UNCX JASPAR yes 100379627
chr6 17447400 17447408 VAX1 JASPAR yes 100379628
chr6 17447400 17447408 VAX2 JASPAR yes 100379629
chr6 17447400 17447408 VSX1 JASPAR yes 100379630
chr6 17447400 17447408 VSX2 JASPAR yes 100379631
chr6 17447400 17447410 HOXB13 JASPAR yes 70327766
chr6 17447400 17447410 HOXD13 JASPAR yes 70327767
chr6 17447400 17447410 HOXB13 JASPAR yes 100379632
chr6 17447400 17447410 HOXD13 JASPAR yes 100379633
chr6 17447401 17447422 IRF1 JASPAR yes 70327768
chr6 17447401 17447422 IRF1 JASPAR yes 100379634
chr6 17447402 17447423 IRF1 JASPAR yes 70327769
chr6 17447402 17447423 IRF1 JASPAR yes 100379635
chr6 17447403 17447418 FOXP1 JASPAR yes 70327770
chr6 17447403 17447418 FOXP1 JASPAR yes 100379636
chr6 17447404 17447419 FOXP1 JASPAR yes 70327771
chr6 17447404 17447419 FOXP1 JASPAR yes 100379637
chr6 17447405 17447411 TBP TRANSFAC yes 70327772
chr6 17447405 17447411 TBP TRANSFAC yes 100379638
chr6 17447405 17447420 FOXP1 JASPAR yes 70327773
chr6 17447405 17447420 FOXP1 JASPAR yes 100379639
chr6 17447405 17447426 IRF1 JASPAR yes 70327774
chr6 17447405 17447426 IRF1 JASPAR yes 100379640
chr6 17447406 17447421 FOXP1 JASPAR yes 70327775
chr6 17447406 17447421 FOXP1 JASPAR yes 100379641
chr6 17447406 17447427 IRF1 JASPAR yes 70327776
chr6 17447406 17447427 IRF1 JASPAR yes 100379642
chr6 17447407 17447422 FOXP1 JASPAR yes 70327777
chr6 17447407 17447422 FOXP1 JASPAR yes 100379643
chr6 17447408 17447423 FOXP1 JASPAR yes 70327778
chr6 17447408 17447423 FOXP1 JASPAR yes 100379644
chr6 17447409 17447424 FOXP1 JASPAR yes 70327779
chr6 17447409 17447424 FOXP1 JASPAR yes 100379645
chr6 17447409 17447430 IRF1 JASPAR yes 70327780
chr6 17447409 17447430 IRF1 JASPAR yes 100379646
chr6 17447410 17447425 FOXP1 JASPAR yes 70327781
chr6 17447410 17447425 FOXP1 JASPAR yes 100379647
chr6 17447413 17447428 PRDM1 JASPAR yes 70327782
chr6 17447413 17447428 STAT2 JASPAR yes 70327783
chr6 17447413 17447428 PRDM1 JASPAR yes 100379648
chr6 17447413 17447428 STAT2 JASPAR yes 100379649
chr6 17447437 17447448 NFKB1 JASPAR yes 70327784
chr6 17447437 17447448 NFKB1 JASPAR yes 100379650
chr6 17447453 17447463 MZF1 JASPAR yes 70327785
chr6 17447453 17447463 MZF1 JASPAR yes 100379651
chr6 17447458 17447469 GCM1 JASPAR yes 70327786
chr6 17447458 17447469 GCM1 JASPAR yes 100379652
chr6 17447467 17447472 MYB TRANSFAC yes 70327787
chr6 17447467 17447472 MYB TRANSFAC yes 100379653
chr6 17447494 17447508 PLAG1 JASPAR yes 70327788
chr6 17447494 17447508 PLAG1 JASPAR yes 100379654
chr6 17447520 17447524 YY1 TRANSFAC yes 70327789
chr6 17447520 17447524 YY1 TRANSFAC yes 100379655
chr6 17447534 17447540 YY1 JASPAR yes 70327790
chr6 17447534 17447540 YY1 JASPAR yes 100379656
chr6 17447545 17447559 TLX1 JASPAR yes 70327791
chr6 17447545 17447559 TLX1 JASPAR yes 100379657
chr6 17447575 17447586 DUX4 JASPAR yes 70327792
chr6 17447575 17447586 DUX4 JASPAR yes 100379658
chr6 17447577 17447598 IRF1 JASPAR yes 70327793
chr6 17447577 17447598 IRF1 JASPAR yes 100379659
chr6 17447579 17447582 MYB TRANSFAC yes 70327794
chr6 17447579 17447582 MYB TRANSFAC yes 100379660
chr6 17447579 17447594 PRDM1 JASPAR yes 70327795
chr6 17447579 17447594 STAT2 JASPAR yes 70327796
chr6 17447579 17447594 PRDM1 JASPAR yes 100379661
chr6 17447579 17447594 STAT2 JASPAR yes 100379662
chr6 17447580 17447594 STAT1 JASPAR yes 70327797
chr6 17447580 17447594 STAT1 JASPAR yes 100379663
chr6 17447594 17447612 IRF2 JASPAR yes 70327798
chr6 17447594 17447612 IRF2 JASPAR yes 100379664
chr6 17447595 17447616 IRF1 JASPAR yes 70327799
chr6 17447595 17447616 IRF1 JASPAR yes 100379665
chr6 17447597 17447612 STAT2 JASPAR yes 70327800
chr6 17447597 17447612 STAT2 JASPAR yes 100379666
chr6 17447598 17447602 YY1 TRANSFAC yes 70327801
chr6 17447598 17447602 YY1 TRANSFAC yes 100379667
chr6 17447598 17447612 STAT1 JASPAR yes 70327802
chr6 17447598 17447612 STAT1 JASPAR yes 100379668
chr6 17447599 17447611 IRF1 JASPAR yes 70327803
chr6 17447599 17447611 IRF1 JASPAR yes 100379669
chr6 17447599 17447613 IRF7 JASPAR yes 70327804
chr6 17447599 17447613 IRF8 JASPAR yes 70327805
chr6 17447599 17447613 IRF7 JASPAR yes 100379670
chr6 17447599 17447613 IRF8 JASPAR yes 100379671
chr6 17447599 17447614 IRF9 JASPAR yes 70327806
chr6 17447599 17447614 IRF9 JASPAR yes 100379672
chr6 17447605 17447615 NFATC3 JASPAR yes 70327807
chr6 17447605 17447615 NFATC3 JASPAR yes 100379673
chr6 17447605 17447617 POU2F1 JASPAR yes 70327808
chr6 17447605 17447617 POU2F1 JASPAR yes 100379674
chr6 17447606 17447613 NFATC2 JASPAR yes 70327809
chr6 17447606 17447613 NFATC2 JASPAR yes 100379675
chr6 17447607 17447625 SRF JASPAR yes 70327810
chr6 17447607 17447625 SRF JASPAR yes 100379676
SNP sites on vista51190[chr6:17447404-17447614]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 17447406 rs398000675 TA T
ALX3 BSX DLX6 EMX1 EMX2 EN1 ESX1 FOXP1 GBX2 GSX1 GSX2 HESX1 HOXA10 HOXB13 HOXB2 HOXB3 HOXD13 IRF1 ISX LBX1 LBX2 LHX2 LHX6 LHX9 LMX1A LMX1B MEOX1 MEOX2 MIXL1 MNX1 NKX6-1 NKX6-2 NOTO PAX4 PDX1 POU6F2 PRRX1 RAX RAX2 SHOX TBP UNCX VAX1 VAX2 VSX1 VSX2
8877319
chr6 17447406 rs5874607 TA T
ALX3 BSX DLX6 EMX1 EMX2 EN1 ESX1 FOXP1 GBX2 GSX1 GSX2 HESX1 HOXA10 HOXB13 HOXB2 HOXB3 HOXD13 IRF1 ISX LBX1 LBX2 LHX2 LHX6 LHX9 LMX1A LMX1B MEOX1 MEOX2 MIXL1 MNX1 NKX6-1 NKX6-2 NOTO PAX4 PDX1 POU6F2 PRRX1 RAX RAX2 SHOX TBP UNCX VAX1 VAX2 VSX1 VSX2
8877320
chr6 17447406 rs745898494 TA T
ALX3 BSX DLX6 EMX1 EMX2 EN1 ESX1 FOXP1 GBX2 GSX1 GSX2 HESX1 HOXA10 HOXB13 HOXB2 HOXB3 HOXD13 IRF1 ISX LBX1 LBX2 LHX2 LHX6 LHX9 LMX1A LMX1B MEOX1 MEOX2 MIXL1 MNX1 NKX6-1 NKX6-2 NOTO PAX4 PDX1 POU6F2 PRRX1 RAX RAX2 SHOX TBP UNCX VAX1 VAX2 VSX1 VSX2
8877321
chr6 17447407 rs544045569 A T
ALX3 BSX DLX6 EMX1 EMX2 EN1 ESX1 FOXP1 GBX2 GSX1 GSX2 HESX1 HOXA10 HOXB13 HOXB2 HOXB3 HOXD13 IRF1 ISX LBX1 LBX2 LHX2 LHX6 LHX9 LMX1A LMX1B MEOX1 MEOX2 MIXL1 MNX1 NKX6-1 NKX6-2 NOTO PAX4 PDX1 POU6F2 PRRX1 RAX RAX2 SHOX TBP UNCX VAX1 VAX2 VSX1 VSX2
8877322
chr6 17447459 rs74804681 C G
GCM1 MZF1
8877323
Genes possibly regulated by vista51190[chr6:17447404-17447614]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 17393447 17558023 + CAP2 ENSG00000112186.7 17393447 0.81 0.97 6182 46043
Expression level of Genes
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miRNAs possibly regulated by vista51190[chr6:17447404-17447614]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results