EnhancerDB
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  3. rs5874607[chr6:17447406]
Enhancers that have rs5874607[chr6:17447406]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17446425 17457735 enh38853
Brain (SK-N-MC) Large Intestine Astrocyte Thyroid Uterus Neural Stem Cells (H9)
chr6 17447404 17447614 vista51190
VISTA
Transcript factors that have rs5874607[chr6:17447406]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17447398 17447408 POU6F2 JASPAR yes 70327725
chr6 17447398 17447408 POU6F2 JASPAR yes 100379591
chr6 17447399 17447409 ALX3 JASPAR yes 70327726
chr6 17447399 17447409 EMX1 JASPAR yes 70327727
chr6 17447399 17447409 EMX2 JASPAR yes 70327728
chr6 17447399 17447409 ESX1 JASPAR yes 70327729
chr6 17447399 17447409 GBX2 JASPAR yes 70327730
chr6 17447399 17447409 GSX1 JASPAR yes 70327731
chr6 17447399 17447409 GSX2 JASPAR yes 70327732
chr6 17447399 17447409 HESX1 JASPAR yes 70327733
chr6 17447399 17447409 HOXB2 JASPAR yes 70327734
chr6 17447399 17447409 HOXB3 JASPAR yes 70327735
chr6 17447399 17447409 LBX2 JASPAR yes 70327736
chr6 17447399 17447409 LHX2 JASPAR yes 70327737
chr6 17447399 17447409 LHX6 JASPAR yes 70327738
chr6 17447399 17447409 MEOX1 JASPAR yes 70327739
chr6 17447399 17447409 MEOX2 JASPAR yes 70327740
chr6 17447399 17447409 MIXL1 JASPAR yes 70327741
chr6 17447399 17447409 MNX1 JASPAR yes 70327742
chr6 17447399 17447409 NOTO JASPAR yes 70327743
chr6 17447399 17447409 RAX JASPAR yes 70327744
chr6 17447399 17447409 ALX3 JASPAR yes 100379592
chr6 17447399 17447409 EMX1 JASPAR yes 100379593
chr6 17447399 17447409 EMX2 JASPAR yes 100379594
chr6 17447399 17447409 ESX1 JASPAR yes 100379595
chr6 17447399 17447409 GBX2 JASPAR yes 100379596
chr6 17447399 17447409 GSX1 JASPAR yes 100379597
chr6 17447399 17447409 GSX2 JASPAR yes 100379598
chr6 17447399 17447409 HESX1 JASPAR yes 100379599
chr6 17447399 17447409 HOXB2 JASPAR yes 100379600
chr6 17447399 17447409 HOXB3 JASPAR yes 100379601
chr6 17447399 17447409 LBX2 JASPAR yes 100379602
chr6 17447399 17447409 LHX2 JASPAR yes 100379603
chr6 17447399 17447409 LHX6 JASPAR yes 100379604
chr6 17447399 17447409 MEOX1 JASPAR yes 100379605
chr6 17447399 17447409 MEOX2 JASPAR yes 100379606
chr6 17447399 17447409 MIXL1 JASPAR yes 100379607
chr6 17447399 17447409 MNX1 JASPAR yes 100379608
chr6 17447399 17447409 NOTO JASPAR yes 100379609
chr6 17447399 17447409 RAX JASPAR yes 100379610
chr6 17447399 17447410 HOXA10 JASPAR yes 70327745
chr6 17447399 17447410 HOXA10 JASPAR yes 100379611
chr6 17447400 17447408 BSX JASPAR yes 70327746
chr6 17447400 17447408 DLX6 JASPAR yes 70327747
chr6 17447400 17447408 EN1 JASPAR yes 70327748
chr6 17447400 17447408 ISX JASPAR yes 70327749
chr6 17447400 17447408 LBX1 JASPAR yes 70327750
chr6 17447400 17447408 LHX9 JASPAR yes 70327751
chr6 17447400 17447408 LMX1A JASPAR yes 70327752
chr6 17447400 17447408 LMX1B JASPAR yes 70327753
chr6 17447400 17447408 NKX6-1 JASPAR yes 70327754
chr6 17447400 17447408 NKX6-2 JASPAR yes 70327755
chr6 17447400 17447408 PAX4 JASPAR yes 70327756
chr6 17447400 17447408 PDX1 JASPAR yes 70327757
chr6 17447400 17447408 PRRX1 JASPAR yes 70327758
chr6 17447400 17447408 RAX2 JASPAR yes 70327759
chr6 17447400 17447408 SHOX JASPAR yes 70327760
chr6 17447400 17447408 UNCX JASPAR yes 70327761
chr6 17447400 17447408 VAX1 JASPAR yes 70327762
chr6 17447400 17447408 VAX2 JASPAR yes 70327763
chr6 17447400 17447408 VSX1 JASPAR yes 70327764
chr6 17447400 17447408 VSX2 JASPAR yes 70327765
chr6 17447400 17447408 BSX JASPAR yes 100379612
chr6 17447400 17447408 DLX6 JASPAR yes 100379613
chr6 17447400 17447408 EN1 JASPAR yes 100379614
chr6 17447400 17447408 ISX JASPAR yes 100379615
chr6 17447400 17447408 LBX1 JASPAR yes 100379616
chr6 17447400 17447408 LHX9 JASPAR yes 100379617
chr6 17447400 17447408 LMX1A JASPAR yes 100379618
chr6 17447400 17447408 LMX1B JASPAR yes 100379619
chr6 17447400 17447408 NKX6-1 JASPAR yes 100379620
chr6 17447400 17447408 NKX6-2 JASPAR yes 100379621
chr6 17447400 17447408 PAX4 JASPAR yes 100379622
chr6 17447400 17447408 PDX1 JASPAR yes 100379623
chr6 17447400 17447408 PRRX1 JASPAR yes 100379624
chr6 17447400 17447408 RAX2 JASPAR yes 100379625
chr6 17447400 17447408 SHOX JASPAR yes 100379626
chr6 17447400 17447408 UNCX JASPAR yes 100379627
chr6 17447400 17447408 VAX1 JASPAR yes 100379628
chr6 17447400 17447408 VAX2 JASPAR yes 100379629
chr6 17447400 17447408 VSX1 JASPAR yes 100379630
chr6 17447400 17447408 VSX2 JASPAR yes 100379631
chr6 17447400 17447410 HOXB13 JASPAR yes 70327766
chr6 17447400 17447410 HOXD13 JASPAR yes 70327767
chr6 17447400 17447410 HOXB13 JASPAR yes 100379632
chr6 17447400 17447410 HOXD13 JASPAR yes 100379633
chr6 17447401 17447422 IRF1 JASPAR yes 70327768
chr6 17447401 17447422 IRF1 JASPAR yes 100379634
chr6 17447402 17447423 IRF1 JASPAR yes 70327769
chr6 17447402 17447423 IRF1 JASPAR yes 100379635
chr6 17447403 17447418 FOXP1 JASPAR yes 70327770
chr6 17447403 17447418 FOXP1 JASPAR yes 100379636
chr6 17447404 17447419 FOXP1 JASPAR yes 70327771
chr6 17447404 17447419 FOXP1 JASPAR yes 100379637
chr6 17447405 17447411 TBP TRANSFAC yes 70327772
chr6 17447405 17447411 TBP TRANSFAC yes 100379638
chr6 17447405 17447420 FOXP1 JASPAR yes 70327773
chr6 17447405 17447420 FOXP1 JASPAR yes 100379639
chr6 17447405 17447426 IRF1 JASPAR yes 70327774
chr6 17447405 17447426 IRF1 JASPAR yes 100379640
chr6 17447406 17447421 FOXP1 JASPAR yes 70327775
chr6 17447406 17447421 FOXP1 JASPAR yes 100379641
chr6 17447406 17447427 IRF1 JASPAR yes 70327776
chr6 17447406 17447427 IRF1 JASPAR yes 100379642
Genes associated with rs5874607[chr6:17447406], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More