EnhancerDB
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  3. vista51199[chr6:17910535-17910706]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51199[chr6:17910535-17910706]
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Tissue distribution of vista51199
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Transcription factor that possibly regulate vista51199[chr6:17910535-17910706]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 17910439 17910814 IRF1 UCSC Txn Factor no Conserved 108538948
chr6 17910558 17910568 MSC JASPAR yes 70328190
chr6 17910558 17910568 MSC JASPAR yes 100404665
chr6 17910564 17910575 CDX2 JASPAR yes 70328191
chr6 17910564 17910575 CDX2 JASPAR yes 100404666
chr6 17910565 17910576 HOXA10 JASPAR yes 70328192
chr6 17910565 17910576 HOXA10 JASPAR yes 100404667
chr6 17910566 17910575 CDX1 JASPAR yes 70328193
chr6 17910566 17910575 CDX1 JASPAR yes 100404668
chr6 17910566 17910576 HOXA13 JASPAR yes 70328194
chr6 17910566 17910576 HOXB13 JASPAR yes 70328195
chr6 17910566 17910576 HOXD13 JASPAR yes 70328196
chr6 17910566 17910576 HOXA13 JASPAR yes 100404669
chr6 17910566 17910576 HOXB13 JASPAR yes 100404670
chr6 17910566 17910576 HOXD13 JASPAR yes 100404671
chr6 17910570 17910584 SPI1 JASPAR yes 70328197
chr6 17910570 17910584 SPI1 JASPAR yes 100404672
chr6 17910583 17910589 HiNF-A TRANSFAC yes 70328198
chr6 17910583 17910589 HiNF-A TRANSFAC yes 100404673
chr6 17910583 17910593 MAX JASPAR yes 70328199
chr6 17910583 17910593 MAX JASPAR yes 100404674
chr6 17910584 17910594 CLOCK JASPAR yes 70328200
chr6 17910584 17910594 CLOCK JASPAR yes 100404675
chr6 17910599 17910610 FOXH1 JASPAR yes 70328201
chr6 17910599 17910610 FOXH1 JASPAR yes 100404676
chr6 17910603 17910607 YY1 TRANSFAC yes 70328202
chr6 17910603 17910607 YY1 TRANSFAC yes 100404677
chr6 17910603 17910621 SRF JASPAR yes 70328203
chr6 17910603 17910621 SRF JASPAR yes 100404678
chr6 17910605 17910620 MEF2C JASPAR yes 70328204
chr6 17910605 17910620 MEF2C JASPAR yes 100404679
chr6 17910606 17910621 MEF2A JASPAR yes 70328205
chr6 17910606 17910621 MEF2A JASPAR yes 100404680
chr6 17910607 17910619 MEF2A JASPAR yes 70328206
chr6 17910607 17910619 MEF2B JASPAR yes 70328207
chr6 17910607 17910619 MEF2D JASPAR yes 70328208
chr6 17910607 17910619 MEF2A JASPAR yes 100404681
chr6 17910607 17910619 MEF2B JASPAR yes 100404682
chr6 17910607 17910619 MEF2D JASPAR yes 100404683
chr6 17910612 17910633 IRF1 JASPAR yes 70328209
chr6 17910612 17910633 IRF1 JASPAR yes 100404684
chr6 17910614 17910629 IRF9 JASPAR yes 70328210
chr6 17910614 17910629 IRF9 JASPAR yes 100404685
chr6 17910615 17910629 IRF7 JASPAR yes 70328211
chr6 17910615 17910629 IRF8 JASPAR yes 70328212
chr6 17910615 17910629 IRF7 JASPAR yes 100404686
chr6 17910615 17910629 IRF8 JASPAR yes 100404687
chr6 17910616 17910630 STAT1 JASPAR yes 70328213
chr6 17910616 17910630 STAT1 JASPAR yes 100404688
chr6 17910616 17910631 STAT2 JASPAR yes 70328214
chr6 17910616 17910631 STAT2 JASPAR yes 100404689
chr6 17910631 17910649 NFYA JASPAR yes 70328215
chr6 17910631 17910649 NFYA JASPAR yes 100404690
chr6 17910637 17910655 IRF2 JASPAR yes 70328216
chr6 17910637 17910655 IRF2 JASPAR yes 100404691
chr6 17910638 17910648 MSC JASPAR yes 70328217
chr6 17910638 17910648 MSC JASPAR yes 100404692
chr6 17910638 17910659 IRF1 JASPAR yes 70328218
chr6 17910638 17910659 IRF1 JASPAR yes 100404693
chr6 17910640 17910655 STAT2 JASPAR yes 70328219
chr6 17910640 17910655 STAT2 JASPAR yes 100404694
chr6 17910641 17910655 STAT1 JASPAR yes 70328220
chr6 17910641 17910655 STAT1 JASPAR yes 100404695
chr6 17910642 17910654 IRF1 JASPAR yes 70328221
chr6 17910642 17910654 IRF1 JASPAR yes 100404696
chr6 17910642 17910656 IRF7 JASPAR yes 70328222
chr6 17910642 17910656 IRF8 JASPAR yes 70328223
chr6 17910642 17910656 IRF7 JASPAR yes 100404697
chr6 17910642 17910656 IRF8 JASPAR yes 100404698
chr6 17910642 17910657 IRF9 JASPAR yes 70328224
chr6 17910642 17910657 IRF9 JASPAR yes 100404699
chr6 17910646 17910661 PRDM1 JASPAR yes 70328225
chr6 17910646 17910661 STAT2 JASPAR yes 70328226
chr6 17910646 17910661 PRDM1 JASPAR yes 100404700
chr6 17910646 17910661 STAT2 JASPAR yes 100404701
chr6 17910647 17910661 STAT1 JASPAR yes 70328227
chr6 17910647 17910661 STAT1 JASPAR yes 100404702
chr6 17910651 17910656 ETS2 TRANSFAC yes 70328228
chr6 17910651 17910656 ETS2 TRANSFAC yes 100404703
chr6 17910655 17910666 STAT3 JASPAR yes 70328229
chr6 17910655 17910666 STAT3 JASPAR yes 100404704
chr6 17910655 17910670 MEF2C JASPAR yes 70328230
chr6 17910655 17910670 MEF2C JASPAR yes 100404705
chr6 17910669 17910685 POU4F2 JASPAR yes 70328231
chr6 17910669 17910685 POU4F2 JASPAR yes 100404706
chr6 17910694 17910699 GATA2 JASPAR yes 70328232
chr6 17910694 17910699 GATA2 JASPAR yes 100404707
chr6 17910705 17910709 H1TF2 TRANSFAC yes 70328233
chr6 17910705 17910709 NFE TRANSFAC yes 70328234
chr6 17910705 17910709 SRF TRANSFAC yes 70328235
chr6 17910705 17910709 H1TF2 TRANSFAC yes 100404708
chr6 17910705 17910709 NFE TRANSFAC yes 100404709
chr6 17910705 17910709 SRF TRANSFAC yes 100404710
SNP sites on vista51199[chr6:17910535-17910706]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 17910545 rs1983575 C T
IRF1
8879673
chr6 17910649 rs539895037 A G
IRF1 IRF2 IRF7 IRF8 IRF9 NFYA PRDM1 STAT1 STAT2
8879674
Genes possibly regulated by vista51199[chr6:17910535-17910706]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 17759414 17987854 - KIF13A ENSG00000137177.14 17987854 0.85 0.99 6185 22852
Expression level of Genes
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miRNAs possibly regulated by vista51199[chr6:17910535-17910706]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results