EnhancerDB
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  3. rs539895037[chr6:17910649]
Enhancers that have rs539895037[chr6:17910649]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17902765 17917095 enh23087
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Muscle (A673) Placenta Colon (HCT116) Thyroid Adrenal Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus
chr6 17910535 17910706 vista51199
VISTA
Transcript factors that have rs539895037[chr6:17910649]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17910439 17910814 IRF1 UCSC Txn Factor no Conserved 108538948
chr6 17910631 17910649 NFYA JASPAR yes 70328215
chr6 17910631 17910649 NFYA JASPAR yes 100404690
chr6 17910637 17910655 IRF2 JASPAR yes 70328216
chr6 17910637 17910655 IRF2 JASPAR yes 100404691
chr6 17910638 17910659 IRF1 JASPAR yes 70328218
chr6 17910638 17910659 IRF1 JASPAR yes 100404693
chr6 17910640 17910655 STAT2 JASPAR yes 70328219
chr6 17910640 17910655 STAT2 JASPAR yes 100404694
chr6 17910641 17910655 STAT1 JASPAR yes 70328220
chr6 17910641 17910655 STAT1 JASPAR yes 100404695
chr6 17910642 17910654 IRF1 JASPAR yes 70328221
chr6 17910642 17910654 IRF1 JASPAR yes 100404696
chr6 17910642 17910656 IRF7 JASPAR yes 70328222
chr6 17910642 17910656 IRF8 JASPAR yes 70328223
chr6 17910642 17910656 IRF7 JASPAR yes 100404697
chr6 17910642 17910656 IRF8 JASPAR yes 100404698
chr6 17910642 17910657 IRF9 JASPAR yes 70328224
chr6 17910642 17910657 IRF9 JASPAR yes 100404699
chr6 17910646 17910661 PRDM1 JASPAR yes 70328225
chr6 17910646 17910661 STAT2 JASPAR yes 70328226
chr6 17910646 17910661 PRDM1 JASPAR yes 100404700
chr6 17910646 17910661 STAT2 JASPAR yes 100404701
chr6 17910647 17910661 STAT1 JASPAR yes 70328227
chr6 17910647 17910661 STAT1 JASPAR yes 100404702
Genes associated with rs539895037[chr6:17910649], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More