EnhancerDB
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  3. vista51507[chr6:30069810-30070038]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51507[chr6:30069810-30070038]
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Tissue distribution of vista51507
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Transcription factor that possibly regulate vista51507[chr6:30069810-30070038]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 30069557 30070345 POLR2A UCSC Txn Factor no Conserved 108539468
chr6 30069677 30070265 TAF1 UCSC Txn Factor no Conserved 108539469
chr6 30069806 30069812 LEF1 TRANSFAC yes 70342318
chr6 30069806 30069812 SOX10 JASPAR yes 70342319
chr6 30069806 30069812 LEF1 TRANSFAC yes 101025637
chr6 30069806 30069812 SOX10 JASPAR yes 101025638
chr6 30069830 30069845 RFX5 JASPAR yes 70342320
chr6 30069830 30069845 RFX5 JASPAR yes 101025639
chr6 30069897 30069901 ESR1 TRANSFAC yes 70342321
chr6 30069897 30069901 ESR1 TRANSFAC yes 101025640
chr6 30069903 30069922 CTCF JASPAR yes 70342322
chr6 30069903 30069922 CTCF JASPAR yes 101025641
chr6 30069909 30069924 STAT1 JASPAR yes 70342323
chr6 30069909 30069924 STAT1 JASPAR yes 101025642
chr6 30069914 30069921 ETS1 TRANSFAC yes 70342324
chr6 30069914 30069921 ETS1 TRANSFAC yes 101025643
chr6 30069916 30069926 NFKB1 JASPAR yes 70342325
chr6 30069916 30069926 NFKB1 JASPAR yes 101025644
chr6 30069922 30069928 SP1 TRANSFAC yes 70342326
chr6 30069922 30069928 SP1 TRANSFAC yes 101025645
chr6 30069924 30069939 RFX5 JASPAR yes 70342327
chr6 30069924 30069939 RFX5 JASPAR yes 101025646
chr6 30069934 30069955 REST JASPAR yes 70342328
chr6 30069934 30069955 REST JASPAR yes 101025647
chr6 30069945 30069965 TP63 JASPAR yes 70342329
chr6 30069945 30069965 TP63 JASPAR yes 101025648
chr6 30069946 30069964 TP53 JASPAR yes 70342330
chr6 30069946 30069964 TP73 JASPAR yes 70342331
chr6 30069946 30069964 TP53 JASPAR yes 101025649
chr6 30069946 30069964 TP73 JASPAR yes 101025650
chr6 30069965 30069974 SP1 TRANSFAC yes 70342332
chr6 30069965 30069974 SP1 TRANSFAC yes 101025651
chr6 30069966 30069972 SP1 TRANSFAC yes 70342333
chr6 30069966 30069972 SP1 TRANSFAC yes 101025652
chr6 30069966 30069976 SP1 JASPAR yes 70342334
chr6 30069966 30069976 SP1 JASPAR yes 101025653
chr6 30069967 30069974 SP1 TRANSFAC yes 70342335
chr6 30069967 30069974 SP1 TRANSFAC yes 101025654
chr6 30069967 30069982 TFAP2C JASPAR yes 70342336
chr6 30069967 30069982 TFAP2C JASPAR yes 101025655
chr6 30069968 30069973 SP1 TRANSFAC yes 70342337
chr6 30069968 30069973 SP1 TRANSFAC yes 101025656
chr6 30069968 30069974 SP1 TRANSFAC yes 70342338
chr6 30069968 30069974 SP1 TRANSFAC yes 101025657
chr6 30069968 30069975 SP1 TRANSFAC yes 70342339
chr6 30069968 30069975 SP1 TRANSFAC yes 101025658
chr6 30069969 30069981 TFAP2A JASPAR yes 70342340
chr6 30069969 30069981 TFAP2B JASPAR yes 70342341
chr6 30069969 30069981 TFAP2C JASPAR yes 70342342
chr6 30069969 30069981 TFAP2A JASPAR yes 101025659
chr6 30069969 30069981 TFAP2B JASPAR yes 101025660
chr6 30069969 30069981 TFAP2C JASPAR yes 101025661
chr6 30069969 30069984 TFAP2A JASPAR yes 70342343
chr6 30069969 30069984 TFAP2A JASPAR yes 101025662
chr6 30069970 30069979 TFAP2A JASPAR yes 70342344
chr6 30069970 30069979 TFAP2A JASPAR yes 101025663
chr6 30069971 30069980 TFAP2A JASPAR yes 70342345
chr6 30069971 30069980 TFAP2A JASPAR yes 101025664
chr6 30069987 30069996 SP1 TRANSFAC yes 70342346
chr6 30069987 30069996 SP1 TRANSFAC yes 101025665
chr6 30069988 30069996 SP1 TRANSFAC yes 70342347
chr6 30069988 30069996 SP1 TRANSFAC yes 101025666
chr6 30069988 30069998 SP1 JASPAR yes 70342348
chr6 30069988 30069998 SP1 JASPAR yes 101025667
chr6 30070010 30070025 HNF4G JASPAR yes 70342349
chr6 30070010 30070025 HNF4G JASPAR yes 101025668
chr6 30070011 30070025 NR2F1 JASPAR yes 70342350
chr6 30070011 30070025 NR2F1 JASPAR yes 101025669
chr6 30070011 30070026 HNF4A JASPAR yes 70342351
chr6 30070011 30070026 HNF4A JASPAR yes 101025670
SNP sites on vista51507[chr6:30069810-30070038]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 30069822 rs1110448 T C
POLR2A TAF1
8945762
chr6 30069835 rs1108053 C G,T
POLR2A RFX5 TAF1
8945763
chr6 30069847 rs182884231 C T
POLR2A TAF1
8945764
chr6 30069952 rs372830176 GC G
POLR2A REST TAF1 TP53 TP63 TP73
8945765
chr6 30069952 rs5875230 GC G
POLR2A REST TAF1 TP53 TP63 TP73
8945766
chr6 30069957 rs55723260 G A,C
POLR2A TAF1 TP53 TP63 TP73
8945767
chr6 30069982 rs1111180 G C
POLR2A TAF1 TFAP2A TFAP2C
8945768
Genes possibly regulated by vista51507[chr6:30069810-30070038]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 30026676 30032686 + ZNRD1 ENSG00000066379.10 30026676 0.64 0.91 6327 56866
chr6 30034486 30038110 + PPP1R11 ENSG00000204619.3 30034486 0.56 0.71 6328 64676
chr6 30038043 30043664 - RNF39 ENSG00000204618.4 30043664 0.91 0.95 6329 73854
chr6 30070674 30080883 - TRIM31 ENSG00000204616.6 30080883 0.98 0.98 6330 89155
chr6 30103885 30116512 + TRIM40 ENSG00000204614.4 30103885 1.0 0.94 6331 66153
chr6 30119722 30128711 - TRIM10 ENSG00000204613.6 30128711 0.89 0.98 6332 41327
chr6 30130993 30140473 + TRIM15 ENSG00000204610.8 30130993 0.93 0.99 6333 39045
Expression level of Genes
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miRNAs possibly regulated by vista51507[chr6:30069810-30070038]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results