EnhancerDB
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  3. rs5875230[chr6:30069952]
Enhancers that have rs5875230[chr6:30069952]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30057405 30070655 enh23147
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myotube) Blood (T-cell) Stomach
chr6 30069810 30070038 vista51507
VISTA
Transcript factors that have rs5875230[chr6:30069952]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30069557 30070345 POLR2A UCSC Txn Factor no Conserved 108539468
chr6 30069677 30070265 TAF1 UCSC Txn Factor no Conserved 108539469
chr6 30069934 30069955 REST JASPAR yes 70342328
chr6 30069934 30069955 REST JASPAR yes 101025647
chr6 30069945 30069965 TP63 JASPAR yes 70342329
chr6 30069945 30069965 TP63 JASPAR yes 101025648
chr6 30069946 30069964 TP53 JASPAR yes 70342330
chr6 30069946 30069964 TP73 JASPAR yes 70342331
chr6 30069946 30069964 TP53 JASPAR yes 101025649
chr6 30069946 30069964 TP73 JASPAR yes 101025650
Genes associated with rs5875230[chr6:30069952], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More