EnhancerDB
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  3. vista51551[chr6:30789955-30790218]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51551[chr6:30789955-30790218]
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Tissue distribution of vista51551
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Transcription factor that possibly regulate vista51551[chr6:30789955-30790218]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 30789682 30790078 CTCF UCSC Txn Factor no Conserved 108539556
chr6 30789953 30789968 FOXP1 JASPAR yes 70345046
chr6 30789953 30789968 FOXP1 JASPAR yes 101055102
chr6 30789955 30789967 FOXC2 JASPAR yes 70345047
chr6 30789955 30789967 FOXC2 JASPAR yes 101055103
chr6 30789956 30789967 FOXP2 JASPAR yes 70345048
chr6 30789956 30789967 FOXP2 JASPAR yes 101055104
chr6 30789958 30789973 FOXP1 JASPAR yes 70345049
chr6 30789958 30789973 FOXP1 JASPAR yes 101055105
chr6 30789960 30789975 FOXP1 JASPAR yes 70345050
chr6 30789960 30789975 FOXP1 JASPAR yes 101055106
chr6 30789960 30789981 IRF1 JASPAR yes 70345051
chr6 30789960 30789981 IRF1 JASPAR yes 101055107
chr6 30789964 30789979 STAT2 JASPAR yes 70345052
chr6 30789964 30789979 STAT2 JASPAR yes 101055108
chr6 30789977 30789991 POU4F1 JASPAR yes 70345053
chr6 30789977 30789991 POU4F1 JASPAR yes 101055109
chr6 30789979 30789989 POU6F2 JASPAR yes 70345054
chr6 30789979 30789989 POU6F2 JASPAR yes 101055110
chr6 30789980 30789990 EMX1 JASPAR yes 70345055
chr6 30789980 30789990 HESX1 JASPAR yes 70345056
chr6 30789980 30789990 LHX6 JASPAR yes 70345057
chr6 30789980 30789990 MNX1 JASPAR yes 70345058
chr6 30789980 30789990 POU6F1 JASPAR yes 70345059
chr6 30789980 30789990 RAX JASPAR yes 70345060
chr6 30789980 30789990 EMX1 JASPAR yes 101055111
chr6 30789980 30789990 HESX1 JASPAR yes 101055112
chr6 30789980 30789990 LHX6 JASPAR yes 101055113
chr6 30789980 30789990 MNX1 JASPAR yes 101055114
chr6 30789980 30789990 POU6F1 JASPAR yes 101055115
chr6 30789980 30789990 RAX JASPAR yes 101055116
chr6 30789981 30789989 LMX1A JASPAR yes 70345061
chr6 30789981 30789989 LMX1B JASPAR yes 70345062
chr6 30789981 30789989 NKX6-1 JASPAR yes 70345063
chr6 30789981 30789989 NKX6-2 JASPAR yes 70345064
chr6 30789981 30789989 VAX1 JASPAR yes 70345065
chr6 30789981 30789989 VAX2 JASPAR yes 70345066
chr6 30789981 30789989 VSX1 JASPAR yes 70345067
chr6 30789981 30789989 VSX2 JASPAR yes 70345068
chr6 30789981 30789989 LMX1A JASPAR yes 101055117
chr6 30789981 30789989 LMX1B JASPAR yes 101055118
chr6 30789981 30789989 NKX6-1 JASPAR yes 101055119
chr6 30789981 30789989 NKX6-2 JASPAR yes 101055120
chr6 30789981 30789989 VAX1 JASPAR yes 101055121
chr6 30789981 30789989 VAX2 JASPAR yes 101055122
chr6 30789981 30789989 VSX1 JASPAR yes 101055123
chr6 30789981 30789989 VSX2 JASPAR yes 101055124
chr6 30789986 30790006 PPARG JASPAR yes 70345069
chr6 30789986 30790006 PPARG JASPAR yes 101055125
chr6 30789988 30790006 ESR2 JASPAR yes 70345070
chr6 30789988 30790006 ESR2 JASPAR yes 101055126
chr6 30789998 30790009 EBF1 JASPAR yes 70345071
chr6 30789998 30790009 EBF1 JASPAR yes 101055127
chr6 30790012 30790028 POU4F2 JASPAR yes 70345072
chr6 30790012 30790028 POU4F3 JASPAR yes 70345073
chr6 30790012 30790028 POU4F2 JASPAR yes 101055128
chr6 30790012 30790028 POU4F3 JASPAR yes 101055129
chr6 30790014 30790018 YY1 TRANSFAC yes 70345074
chr6 30790014 30790018 YY1 TRANSFAC yes 101055130
chr6 30790075 30790089 NR2F1 JASPAR yes 70345075
chr6 30790075 30790089 RXRB JASPAR yes 70345076
chr6 30790075 30790089 RXRG JASPAR yes 70345077
chr6 30790075 30790089 NR2F1 JASPAR yes 101055131
chr6 30790075 30790089 RXRB JASPAR yes 101055132
chr6 30790075 30790089 RXRG JASPAR yes 101055133
chr6 30790091 30790096 ETS2 TRANSFAC yes 70345078
chr6 30790091 30790096 ETS2 TRANSFAC yes 101055134
chr6 30790091 30790101 TEAD1 JASPAR yes 70345079
chr6 30790091 30790101 TEAD4 JASPAR yes 70345080
chr6 30790091 30790101 TEAD1 JASPAR yes 101055135
chr6 30790091 30790101 TEAD4 JASPAR yes 101055136
chr6 30790110 30790116 YY1 JASPAR yes 70345081
chr6 30790110 30790116 YY1 JASPAR yes 101055137
chr6 30790118 30790130 IRF1 JASPAR yes 70345082
chr6 30790118 30790130 IRF1 JASPAR yes 101055138
chr6 30790119 30790134 RUNX2 JASPAR yes 70345083
chr6 30790119 30790134 RUNX2 JASPAR yes 101055139
chr6 30790120 30790129 RUNX2 JASPAR yes 70345084
chr6 30790120 30790129 RUNX2 JASPAR yes 101055140
chr6 30790120 30790130 RUNX3 JASPAR yes 70345085
chr6 30790120 30790130 RUNX3 JASPAR yes 101055141
chr6 30790124 30790139 SOX21 JASPAR yes 70345086
chr6 30790124 30790139 SOX21 JASPAR yes 101055142
chr6 30790124 30790140 SOX4 JASPAR yes 70345087
chr6 30790124 30790140 SOX4 JASPAR yes 101055143
chr6 30790145 30790149 YY1 TRANSFAC yes 70345088
chr6 30790145 30790149 YY1 TRANSFAC yes 101055144
chr6 30790172 30790178 HiNF-A TRANSFAC yes 70345089
chr6 30790172 30790178 HiNF-A TRANSFAC yes 101055145
chr6 30790178 30790198 TP63 JASPAR yes 70345090
chr6 30790178 30790198 TP63 JASPAR yes 101055146
chr6 30790179 30790197 TP73 JASPAR yes 70345091
chr6 30790179 30790197 TP73 JASPAR yes 101055147
chr6 30790203 30790211 TBX5 JASPAR yes 70345092
chr6 30790203 30790211 TBX5 JASPAR yes 101055148
chr6 30790208 30790216 EHF JASPAR yes 70345093
chr6 30790208 30790216 EHF JASPAR yes 101055149
chr6 30790210 30790215 ETS2 TRANSFAC yes 70345094
chr6 30790210 30790215 ETS2 TRANSFAC yes 101055150
SNP sites on vista51551[chr6:30789955-30790218]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 30789964 rs200099270 C CA
CTCF FOXC2 FOXP1 FOXP2 IRF1 STAT2
8949941
chr6 30789964 rs28736550 C A
CTCF FOXC2 FOXP1 FOXP2 IRF1 STAT2
8949942
chr6 30789964 rs569430132 C CA,CC
CTCF FOXC2 FOXP1 FOXP2 IRF1 STAT2
8949943
Genes possibly regulated by vista51551[chr6:30789955-30790218]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 30695486 30710510 - FLOT1 ENSG00000137312.10 30710510 0.61 0.86 6351 20555
chr6 30710976 30712331 - IER3 ENSG00000137331.11 30712331 0.82 0.96 6352 22376
chr6 30844198 30867933 + DDR1 ENSG00000204580.7 30844198 0.83 0.82 6353 46020
chr6 30875961 30881883 + GTF2H4 ENSG00000213780.6 30875961 0.64 0.83 6354 14257
chr6 30876019 30894236 + VARS2 ENSG00000137411.12 30876019 0.64 0.72 6355 14199
Expression level of Genes
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miRNAs possibly regulated by vista51551[chr6:30789955-30790218]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results