EnhancerDB
  1. Home
  2. SNP
  3. rs200099270[chr6:30789964]
Enhancers that have rs200099270[chr6:30789964]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 30789955 30790218 vista51551
VISTA
Transcript factors that have rs200099270[chr6:30789964]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30789682 30790078 CTCF UCSC Txn Factor no Conserved 108539556
chr6 30789953 30789968 FOXP1 JASPAR yes 70345046
chr6 30789953 30789968 FOXP1 JASPAR yes 101055102
chr6 30789955 30789967 FOXC2 JASPAR yes 70345047
chr6 30789955 30789967 FOXC2 JASPAR yes 101055103
chr6 30789956 30789967 FOXP2 JASPAR yes 70345048
chr6 30789956 30789967 FOXP2 JASPAR yes 101055104
chr6 30789958 30789973 FOXP1 JASPAR yes 70345049
chr6 30789958 30789973 FOXP1 JASPAR yes 101055105
chr6 30789960 30789975 FOXP1 JASPAR yes 70345050
chr6 30789960 30789975 FOXP1 JASPAR yes 101055106
chr6 30789960 30789981 IRF1 JASPAR yes 70345051
chr6 30789960 30789981 IRF1 JASPAR yes 101055107
chr6 30789964 30789979 STAT2 JASPAR yes 70345052
chr6 30789964 30789979 STAT2 JASPAR yes 101055108
Genes associated with rs200099270[chr6:30789964], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More