EnhancerDB
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  3. vista51553[chr6:30804295-30804603]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51553[chr6:30804295-30804603]
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Tissue distribution of vista51553
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Transcription factor that possibly regulate vista51553[chr6:30804295-30804603]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 30804243 30804517 CEBPB UCSC Txn Factor no Conserved 108539562
chr6 30804299 30804320 REST JASPAR yes 70345173
chr6 30804299 30804320 REST JASPAR yes 101057257
chr6 30804300 30804319 REST JASPAR yes 70345174
chr6 30804300 30804319 REST JASPAR yes 101057258
chr6 30804343 30804363 RREB1 JASPAR yes 70345175
chr6 30804343 30804363 RREB1 JASPAR yes 101057259
chr6 30804346 30804350 YY1 TRANSFAC yes 70345176
chr6 30804346 30804350 YY1 TRANSFAC yes 101057260
chr6 30804346 30804357 CEBPA JASPAR yes 70345177
chr6 30804346 30804357 CEBPA JASPAR yes 101057261
chr6 30804347 30804357 CEBPD JASPAR yes 70345178
chr6 30804347 30804357 CEBPD JASPAR yes 101057262
chr6 30804348 30804359 NFIL3 JASPAR yes 70345179
chr6 30804348 30804359 NFIL3 JASPAR yes 101057263
chr6 30804361 30804372 E2F6 JASPAR yes 70345180
chr6 30804361 30804372 E2F6 JASPAR yes 101057264
chr6 30804380 30804388 HOXA5 JASPAR yes 70345181
chr6 30804380 30804388 HOXA5 JASPAR yes 101057265
chr6 30804381 30804391 EMX1 JASPAR yes 70345182
chr6 30804381 30804391 HOXB3 JASPAR yes 70345183
chr6 30804381 30804391 EMX1 JASPAR yes 101057266
chr6 30804381 30804391 HOXB3 JASPAR yes 101057267
chr6 30804395 30804405 RELA JASPAR yes 70345184
chr6 30804395 30804405 RELA JASPAR yes 101057268
chr6 30804399 30804407 FEV JASPAR yes 70345185
chr6 30804399 30804407 FEV JASPAR yes 101057269
chr6 30804432 30804445 DUXA JASPAR yes 70345186
chr6 30804432 30804445 DUXA JASPAR yes 101057270
chr6 30804433 30804444 DUX4 JASPAR yes 70345187
chr6 30804433 30804444 DUX4 JASPAR yes 101057271
chr6 30804439 30804443 YY1 TRANSFAC yes 70345188
chr6 30804439 30804443 YY1 TRANSFAC yes 101057272
chr6 30804441 30804453 PBX1 JASPAR yes 70345189
chr6 30804441 30804453 PBX1 JASPAR yes 101057273
chr6 30804447 30804453 JUN TRANSFAC yes 70345190
chr6 30804447 30804453 JUN TRANSFAC yes 101057274
chr6 30804458 30804463 ETS2 TRANSFAC yes 70345191
chr6 30804458 30804463 ETS2 TRANSFAC yes 101057275
chr6 30804458 30804468 TEAD1 JASPAR yes 70345192
chr6 30804458 30804468 TEAD4 JASPAR yes 70345193
chr6 30804458 30804468 TEAD1 JASPAR yes 101057276
chr6 30804458 30804468 TEAD4 JASPAR yes 101057277
chr6 30804459 30804467 TEAD3 JASPAR yes 70345194
chr6 30804459 30804467 TEAD3 JASPAR yes 101057278
chr6 30804469 30804473 YY1 TRANSFAC yes 70345195
chr6 30804469 30804473 YY1 TRANSFAC yes 101057279
chr6 30804480 30804484 YY1 TRANSFAC yes 70345196
chr6 30804480 30804484 YY1 TRANSFAC yes 101057280
chr6 30804481 30804491 HOXB13 JASPAR yes 70345197
chr6 30804481 30804491 HOXD13 JASPAR yes 70345198
chr6 30804481 30804491 HOXB13 JASPAR yes 101057281
chr6 30804481 30804491 HOXD13 JASPAR yes 101057282
chr6 30804481 30804492 HOXA10 JASPAR yes 70345199
chr6 30804481 30804492 HOXA10 JASPAR yes 101057283
chr6 30804482 30804491 CDX1 JASPAR yes 70345200
chr6 30804482 30804491 CDX1 JASPAR yes 101057284
chr6 30804482 30804493 CDX2 JASPAR yes 70345201
chr6 30804482 30804493 CDX2 JASPAR yes 101057285
chr6 30804490 30804510 RREB1 JASPAR yes 70345202
chr6 30804490 30804510 RREB1 JASPAR yes 101057286
chr6 30804496 30804511 MEF2C JASPAR yes 70345203
chr6 30804496 30804511 MEF2C JASPAR yes 101057287
chr6 30804497 30804512 MEF2A JASPAR yes 70345204
chr6 30804497 30804512 MEF2A JASPAR yes 101057288
chr6 30804506 30804509 MYB TRANSFAC yes 70345205
chr6 30804506 30804509 MYB TRANSFAC yes 101057289
chr6 30804523 30804528 USF2 TRANSFAC yes 70345206
chr6 30804523 30804528 USF2 TRANSFAC yes 101057290
chr6 30804532 30804536 YY1 TRANSFAC yes 70345207
chr6 30804532 30804536 YY1 TRANSFAC yes 101057291
chr6 30804533 30804543 HOXB13 JASPAR yes 70345208
chr6 30804533 30804543 HOXD13 JASPAR yes 70345209
chr6 30804533 30804543 HOXB13 JASPAR yes 101057292
chr6 30804533 30804543 HOXD13 JASPAR yes 101057293
chr6 30804534 30804543 CDX1 JASPAR yes 70345210
chr6 30804534 30804543 CDX1 JASPAR yes 101057294
chr6 30804534 30804545 CDX2 JASPAR yes 70345211
chr6 30804534 30804545 CDX2 JASPAR yes 101057295
chr6 30804536 30804545 LEF1 TRANSFAC yes 70345212
chr6 30804536 30804545 LEF1 TRANSFAC yes 101057296
chr6 30804537 30804558 IRF1 JASPAR yes 70345213
chr6 30804537 30804558 IRF1 JASPAR yes 101057297
chr6 30804539 30804554 STAT2 JASPAR yes 70345214
chr6 30804539 30804554 STAT2 JASPAR yes 101057298
chr6 30804540 30804554 STAT1 JASPAR yes 70345215
chr6 30804540 30804554 STAT1 JASPAR yes 101057299
chr6 30804541 30804556 IRF9 JASPAR yes 70345216
chr6 30804541 30804556 IRF9 JASPAR yes 101057300
chr6 30804544 30804559 FOXP1 JASPAR yes 70345217
chr6 30804544 30804559 FOXP1 JASPAR yes 101057301
chr6 30804545 30804556 FOXP2 JASPAR yes 70345218
chr6 30804545 30804556 FOXP2 JASPAR yes 101057302
chr6 30804550 30804563 POU2F2 JASPAR yes 70345219
chr6 30804550 30804563 POU2F2 JASPAR yes 101057303
chr6 30804581 30804599 MAFF JASPAR yes 70345220
chr6 30804581 30804599 MAFF JASPAR yes 101057304
chr6 30804582 30804597 MAFK JASPAR yes 70345221
chr6 30804582 30804597 MAFK JASPAR yes 101057305
chr6 30804583 30804597 POU1F1 JASPAR yes 70345222
chr6 30804583 30804597 POU1F1 JASPAR yes 101057306
chr6 30804584 30804597 POU3F3 JASPAR yes 70345223
chr6 30804584 30804597 POU3F3 JASPAR yes 101057307
chr6 30804586 30804597 NRL JASPAR yes 70345224
chr6 30804586 30804597 NRL JASPAR yes 101057308
chr6 30804591 30804595 YY1 TRANSFAC yes 70345225
chr6 30804591 30804595 YY1 TRANSFAC yes 101057309
chr6 30804596 30804613 BCL6B JASPAR yes 70345226
chr6 30804596 30804613 BCL6B JASPAR yes 101057310
chr6 30804597 30804607 NFIA JASPAR yes 70345227
chr6 30804597 30804607 NFIA JASPAR yes 101057311
chr6 30804598 30804607 NFIX JASPAR yes 70345228
chr6 30804598 30804607 NFIX JASPAR yes 101057312
chr6 30804599 30804605 NFIC JASPAR yes 70345229
chr6 30804599 30804605 NFIC JASPAR yes 101057313
SNP sites on vista51553[chr6:30804295-30804603]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 30804424 rs377720618 G A
CEBPB
8950221
chr6 30804549 rs148726872 G GT
FOXP1 FOXP2 IRF1 IRF9 STAT1 STAT2
8950222
Genes possibly regulated by vista51553[chr6:30804295-30804603]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 30695486 30710510 - FLOT1 ENSG00000137312.10 30710510 0.61 0.86 6351 6215
chr6 30710976 30712331 - IER3 ENSG00000137331.11 30712331 0.82 0.96 6352 8036
chr6 30844198 30867933 + DDR1 ENSG00000204580.7 30844198 0.83 0.82 6353 60405
chr6 30875961 30881883 + GTF2H4 ENSG00000213780.6 30875961 0.64 0.83 6354 28642
chr6 30876019 30894236 + VARS2 ENSG00000137411.12 30876019 0.64 0.72 6355 28584
chr6 30899130 30899952 - SFTA2 ENSG00000196260.3 30899952 1.0 0.0 6356 4651
Expression level of Genes
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miRNAs possibly regulated by vista51553[chr6:30804295-30804603]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results