EnhancerDB
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  3. rs148726872[chr6:30804549]
Enhancers that have rs148726872[chr6:30804549]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 30804295 30804603 vista51553
VISTA
Transcript factors that have rs148726872[chr6:30804549]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30804537 30804558 IRF1 JASPAR yes 70345213
chr6 30804537 30804558 IRF1 JASPAR yes 101057297
chr6 30804539 30804554 STAT2 JASPAR yes 70345214
chr6 30804539 30804554 STAT2 JASPAR yes 101057298
chr6 30804540 30804554 STAT1 JASPAR yes 70345215
chr6 30804540 30804554 STAT1 JASPAR yes 101057299
chr6 30804541 30804556 IRF9 JASPAR yes 70345216
chr6 30804541 30804556 IRF9 JASPAR yes 101057300
chr6 30804544 30804559 FOXP1 JASPAR yes 70345217
chr6 30804544 30804559 FOXP1 JASPAR yes 101057301
chr6 30804545 30804556 FOXP2 JASPAR yes 70345218
chr6 30804545 30804556 FOXP2 JASPAR yes 101057302
Genes associated with rs148726872[chr6:30804549], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More