EnhancerDB
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  3. vista51946[chr6:42013318-42013860]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51946[chr6:42013318-42013860]
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Tissue distribution of vista51946
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Transcription factor that possibly regulate vista51946[chr6:42013318-42013860]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42013330 42013690 STAT1 UCSC Txn Factor no Conserved 108540228
chr6 42013337 42013693 STAT2 UCSC Txn Factor no Conserved 108540229
chr6 42013442 42013771 NR3C1 UCSC Txn Factor no Conserved 108540230
chr6 42013457 42013726 RUNX3 UCSC Txn Factor no Conserved 108540231
chr6 42013315 42013328 HSF2 JASPAR yes 70363962
chr6 42013315 42013328 HSF2 JASPAR yes 101689771
chr6 42013319 42013334 HSF1 JASPAR yes 70363963
chr6 42013319 42013334 HSF1 JASPAR yes 101689772
chr6 42013350 42013364 EBF1 JASPAR yes 70363964
chr6 42013350 42013364 EBF1 JASPAR yes 101689773
chr6 42013352 42013363 EBF1 JASPAR yes 70363965
chr6 42013352 42013363 EBF1 JASPAR yes 101689774
chr6 42013356 42013369 NFKB1 JASPAR yes 70363966
chr6 42013356 42013369 NFKB1 JASPAR yes 101689775
chr6 42013357 42013367 NFKB1 JASPAR yes 70363967
chr6 42013357 42013367 RELA JASPAR yes 70363968
chr6 42013357 42013367 REL JASPAR yes 70363969
chr6 42013357 42013367 NFKB1 JASPAR yes 101689776
chr6 42013357 42013367 RELA JASPAR yes 101689777
chr6 42013357 42013367 REL JASPAR yes 101689778
chr6 42013357 42013368 NFKB1 JASPAR yes 70363970
chr6 42013357 42013368 NFKB1 JASPAR yes 101689779
chr6 42013358 42013368 RELA JASPAR yes 70363971
chr6 42013358 42013368 RELA JASPAR yes 101689780
chr6 42013377 42013380 MYB TRANSFAC yes 70363972
chr6 42013377 42013380 MYB TRANSFAC yes 101689781
chr6 42013386 42013390 H1TF2 TRANSFAC yes 70363973
chr6 42013386 42013390 NFE TRANSFAC yes 70363974
chr6 42013386 42013390 SRF TRANSFAC yes 70363975
chr6 42013386 42013390 H1TF2 TRANSFAC yes 101689782
chr6 42013386 42013390 NFE TRANSFAC yes 101689783
chr6 42013386 42013390 SRF TRANSFAC yes 101689784
chr6 42013393 42013397 YY1 TRANSFAC yes 70363976
chr6 42013393 42013397 YY1 TRANSFAC yes 101689785
chr6 42013395 42013410 HSF1 JASPAR yes 70363977
chr6 42013395 42013410 HSF1 JASPAR yes 101689786
chr6 42013396 42013409 HSF2 JASPAR yes 70363978
chr6 42013396 42013409 HSF2 JASPAR yes 101689787
chr6 42013428 42013432 LFA1 TRANSFAC yes 70363979
chr6 42013428 42013432 LFA1 TRANSFAC yes 101689788
chr6 42013437 42013444 MEIS1 JASPAR yes 70363980
chr6 42013437 42013444 MEIS1 JASPAR yes 101689789
chr6 42013437 42013445 MEIS2 JASPAR yes 70363981
chr6 42013437 42013445 MEIS3 JASPAR yes 70363982
chr6 42013437 42013445 MEIS2 JASPAR yes 101689790
chr6 42013437 42013445 MEIS3 JASPAR yes 101689791
chr6 42013439 42013449 MSC JASPAR yes 70363983
chr6 42013439 42013449 MSC JASPAR yes 101689792
chr6 42013486 42013500 FOXF2 JASPAR yes 70363984
chr6 42013486 42013500 FOXF2 JASPAR yes 101689793
chr6 42013486 42013501 FOXP1 JASPAR yes 70363985
chr6 42013486 42013501 FOXP1 JASPAR yes 101689794
chr6 42013487 42013498 FOXA1 JASPAR yes 70363986
chr6 42013487 42013498 FOXA1 JASPAR yes 101689795
chr6 42013488 42013500 FOXC2 JASPAR yes 70363987
chr6 42013488 42013500 FOXC2 JASPAR yes 101689796
chr6 42013489 42013497 GATA3 JASPAR yes 70363988
chr6 42013489 42013497 GATA3 JASPAR yes 101689797
chr6 42013489 42013500 FOXP2 JASPAR yes 70363989
chr6 42013489 42013500 FOXP2 JASPAR yes 101689798
chr6 42013491 42013499 FOXG1 JASPAR yes 70363990
chr6 42013491 42013499 FOXG1 JASPAR yes 101689799
chr6 42013493 42013499 HiNF-A TRANSFAC yes 70363991
chr6 42013493 42013499 HiNF-A TRANSFAC yes 101689800
chr6 42013509 42013524 PRDM1 JASPAR yes 70363992
chr6 42013509 42013524 PRDM1 JASPAR yes 101689801
chr6 42013511 42013532 IRF1 JASPAR yes 70363993
chr6 42013511 42013532 IRF1 JASPAR yes 101689802
chr6 42013515 42013529 STAT1 JASPAR yes 70363994
chr6 42013515 42013529 STAT1 JASPAR yes 101689803
chr6 42013515 42013530 PRDM1 JASPAR yes 70363995
chr6 42013515 42013530 STAT2 JASPAR yes 70363996
chr6 42013515 42013530 PRDM1 JASPAR yes 101689804
chr6 42013515 42013530 STAT2 JASPAR yes 101689805
chr6 42013515 42013533 IRF2 JASPAR yes 70363997
chr6 42013515 42013533 IRF2 JASPAR yes 101689806
chr6 42013525 42013535 NFIA JASPAR yes 70363998
chr6 42013525 42013535 NFIA JASPAR yes 101689807
chr6 42013527 42013533 NFIC JASPAR yes 70363999
chr6 42013527 42013533 NFIC JASPAR yes 101689808
chr6 42013533 42013538 SP1 TRANSFAC yes 70364000
chr6 42013533 42013538 SP1 TRANSFAC yes 101689809
chr6 42013536 42013551 HSF1 JASPAR yes 70364001
chr6 42013536 42013551 HSF1 JASPAR yes 101689810
chr6 42013545 42013566 ZNF263 JASPAR yes 70364002
chr6 42013545 42013566 ZNF263 JASPAR yes 101689811
chr6 42013548 42013554 MZF1 JASPAR yes 70364003
chr6 42013548 42013554 MZF1 JASPAR yes 101689812
chr6 42013549 42013559 SP1 JASPAR yes 70364004
chr6 42013549 42013559 SP1 JASPAR yes 101689813
chr6 42013549 42013569 RREB1 JASPAR yes 70364005
chr6 42013549 42013569 RREB1 JASPAR yes 101689814
chr6 42013549 42013570 ZNF263 JASPAR yes 70364006
chr6 42013549 42013570 ZNF263 JASPAR yes 101689815
chr6 42013552 42013564 INSM1 JASPAR yes 70364007
chr6 42013552 42013564 INSM1 JASPAR yes 101689816
chr6 42013570 42013580 ETV6 JASPAR yes 70364008
chr6 42013570 42013580 ETV6 JASPAR yes 101689817
chr6 42013570 42013581 ELF5 JASPAR yes 70364009
chr6 42013570 42013581 ELF5 JASPAR yes 101689818
chr6 42013570 42013583 ELF1 JASPAR yes 70364010
chr6 42013570 42013583 ELF1 JASPAR yes 101689819
chr6 42013570 42013584 SPI1 JASPAR yes 70364011
chr6 42013570 42013584 SPIC JASPAR yes 70364012
chr6 42013570 42013584 SPI1 JASPAR yes 101689820
chr6 42013570 42013584 SPIC JASPAR yes 101689821
chr6 42013571 42013578 SPI1 JASPAR yes 70364013
chr6 42013571 42013578 SPI1 JASPAR yes 101689822
chr6 42013571 42013579 EHF JASPAR yes 70364014
chr6 42013571 42013579 EHF JASPAR yes 101689823
chr6 42013573 42013580 SPIB JASPAR yes 70364015
chr6 42013573 42013580 SPIB JASPAR yes 101689824
chr6 42013574 42013589 RUNX2 JASPAR yes 70364016
chr6 42013574 42013589 RUNX2 JASPAR yes 101689825
chr6 42013577 42013588 RUNX1 JASPAR yes 70364017
chr6 42013577 42013588 RUNX1 JASPAR yes 101689826
chr6 42013578 42013588 RUNX3 JASPAR yes 70364018
chr6 42013578 42013588 RUNX3 JASPAR yes 101689827
chr6 42013579 42013588 RUNX2 JASPAR yes 70364019
chr6 42013579 42013588 RUNX2 JASPAR yes 101689828
chr6 42013593 42013608 AR JASPAR yes 70364020
chr6 42013593 42013608 AR JASPAR yes 101689829
chr6 42013593 42013610 NR3C1 JASPAR yes 70364021
chr6 42013593 42013610 NR3C2 JASPAR yes 70364022
chr6 42013593 42013610 NR3C1 JASPAR yes 101689830
chr6 42013593 42013610 NR3C2 JASPAR yes 101689831
chr6 42013595 42013610 AR JASPAR yes 70364023
chr6 42013595 42013610 AR JASPAR yes 101689832
chr6 42013597 42013609 GRHL1 JASPAR yes 70364024
chr6 42013597 42013609 GRHL1 JASPAR yes 101689833
chr6 42013600 42013606 PTF TRANSFAC yes 70364025
chr6 42013600 42013606 PTF TRANSFAC yes 101689834
chr6 42013620 42013635 RFX5 JASPAR yes 70364026
chr6 42013620 42013635 RFX5 JASPAR yes 101689835
chr6 42013623 42013638 TFAP2A JASPAR yes 70364027
chr6 42013623 42013638 TFAP2C JASPAR yes 70364028
chr6 42013623 42013638 TFAP2A JASPAR yes 101689836
chr6 42013623 42013638 TFAP2C JASPAR yes 101689837
chr6 42013624 42013635 TFAP2A JASPAR yes 70364029
chr6 42013624 42013635 TFAP2B JASPAR yes 70364030
chr6 42013624 42013635 TFAP2C JASPAR yes 70364031
chr6 42013624 42013635 TFAP2A JASPAR yes 101689838
chr6 42013624 42013635 TFAP2B JASPAR yes 101689839
chr6 42013624 42013635 TFAP2C JASPAR yes 101689840
chr6 42013624 42013636 INSM1 JASPAR yes 70364032
chr6 42013624 42013636 INSM1 JASPAR yes 101689841
chr6 42013625 42013634 TFAP2A JASPAR yes 70364033
chr6 42013625 42013634 TFAP2A JASPAR yes 101689842
chr6 42013629 42013639 SP1 JASPAR yes 70364034
chr6 42013629 42013639 SP1 JASPAR yes 101689843
chr6 42013630 42013634 LFA1 TRANSFAC yes 70364035
chr6 42013630 42013634 LFA1 TRANSFAC yes 101689844
chr6 42013630 42013644 TLX1 JASPAR yes 70364036
chr6 42013630 42013644 TLX1 JASPAR yes 101689845
chr6 42013636 42013641 SP1 TRANSFAC yes 70364037
chr6 42013636 42013641 SP1 TRANSFAC yes 101689846
chr6 42013646 42013655 NFIX JASPAR yes 70364038
chr6 42013646 42013655 NFIX JASPAR yes 101689847
chr6 42013646 42013656 NFIA JASPAR yes 70364039
chr6 42013646 42013656 NFIA JASPAR yes 101689848
chr6 42013648 42013654 NFIC JASPAR yes 70364040
chr6 42013648 42013654 NFIC JASPAR yes 101689849
chr6 42013689 42013695 PEA3 TRANSFAC yes 70364041
chr6 42013689 42013695 PEA3 TRANSFAC yes 101689850
chr6 42013690 42013698 EHF JASPAR yes 70364042
chr6 42013690 42013698 EHF JASPAR yes 101689851
chr6 42013734 42013748 NR2F1 JASPAR yes 70364043
chr6 42013734 42013748 NR2F1 JASPAR yes 101689852
SNP sites on vista51946[chr6:42013318-42013860]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42013360 rs6458267 G T
EBF1 NFKB1 REL RELA STAT1 STAT2
9029528
chr6 42013754 rs564662714 T C
NR3C1
9029529
chr6 42013763 rs79710947 G A
NR3C1
9029530
chr6 42013781 rs141674613 C G no 9029531
chr6 42013815 rs150539982 T C no 9029532
Genes possibly regulated by vista51946[chr6:42013318-42013860]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 41902671 42018095 - CCND3 ENSG00000112576.8 42018095 0.86 0.98 6580 95765
chr6 42018251 42055199 + TAF8 ENSG00000137413.11 42018251 0.74 1.0 6581 95609
chr6 42068856 42110357 - C6orf132 ENSG00000188112.4 42110357 0.89 1.0 6582 3503
Expression level of Genes
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miRNAs possibly regulated by vista51946[chr6:42013318-42013860]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results