EnhancerDB
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  3. rs6458267[chr6:42013360]
Enhancers that have rs6458267[chr6:42013360]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42004605 42015829 enh9109
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr6 42013318 42013860 vista51946
VISTA
Transcript factors that have rs6458267[chr6:42013360]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42013330 42013690 STAT1 UCSC Txn Factor no Conserved 108540228
chr6 42013337 42013693 STAT2 UCSC Txn Factor no Conserved 108540229
chr6 42013350 42013364 EBF1 JASPAR yes 70363964
chr6 42013350 42013364 EBF1 JASPAR yes 101689773
chr6 42013352 42013363 EBF1 JASPAR yes 70363965
chr6 42013352 42013363 EBF1 JASPAR yes 101689774
chr6 42013356 42013369 NFKB1 JASPAR yes 70363966
chr6 42013356 42013369 NFKB1 JASPAR yes 101689775
chr6 42013357 42013367 NFKB1 JASPAR yes 70363967
chr6 42013357 42013367 RELA JASPAR yes 70363968
chr6 42013357 42013367 REL JASPAR yes 70363969
chr6 42013357 42013367 NFKB1 JASPAR yes 101689776
chr6 42013357 42013367 RELA JASPAR yes 101689777
chr6 42013357 42013367 REL JASPAR yes 101689778
chr6 42013357 42013368 NFKB1 JASPAR yes 70363970
chr6 42013357 42013368 NFKB1 JASPAR yes 101689779
chr6 42013358 42013368 RELA JASPAR yes 70363971
chr6 42013358 42013368 RELA JASPAR yes 101689780
Genes associated with rs6458267[chr6:42013360], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 41902671 42018095 - CCND3 ENSG00000112576.8 42018095 0 Pancreas 0.0686162 6580