EnhancerDB
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  3. vista51955[chr6:42258421-42258504]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51955[chr6:42258421-42258504]
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Tissue distribution of vista51955
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Transcription factor that possibly regulate vista51955[chr6:42258421-42258504]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42258407 42258428 ZNF263 JASPAR yes 70364443
chr6 42258407 42258428 ZNF263 JASPAR yes 101704740
chr6 42258409 42258430 ZNF263 JASPAR yes 70364444
chr6 42258409 42258430 ZNF263 JASPAR yes 101704741
chr6 42258411 42258432 ZNF263 JASPAR yes 70364445
chr6 42258411 42258432 ZNF263 JASPAR yes 101704742
chr6 42258412 42258433 ZNF263 JASPAR yes 70364446
chr6 42258412 42258433 ZNF263 JASPAR yes 101704743
chr6 42258417 42258432 FOXP1 JASPAR yes 70364447
chr6 42258417 42258432 FOXP1 JASPAR yes 101704744
chr6 42258417 42258438 IRF1 JASPAR yes 70364448
chr6 42258417 42258438 IRF1 JASPAR yes 101704745
chr6 42258419 42258424 ETS2 TRANSFAC yes 70364449
chr6 42258419 42258424 ETS2 TRANSFAC yes 101704746
chr6 42258421 42258436 STAT2 JASPAR yes 70364450
chr6 42258421 42258436 STAT2 JASPAR yes 101704747
chr6 42258430 42258443 SCRT2 JASPAR yes 70364451
chr6 42258430 42258443 SCRT2 JASPAR yes 101704748
chr6 42258430 42258445 SCRT1 JASPAR yes 70364452
chr6 42258430 42258445 SCRT1 JASPAR yes 101704749
chr6 42258447 42258457 PAX3 JASPAR yes 70364453
chr6 42258447 42258457 PAX7 JASPAR yes 70364454
chr6 42258447 42258457 PAX3 JASPAR yes 101704750
chr6 42258447 42258457 PAX7 JASPAR yes 101704751
chr6 42258447 42258458 PHOX2A JASPAR yes 70364455
chr6 42258447 42258458 PROP1 JASPAR yes 70364456
chr6 42258447 42258458 PHOX2A JASPAR yes 101704752
chr6 42258447 42258458 PROP1 JASPAR yes 101704753
chr6 42258456 42258461 GATA2 JASPAR yes 70364457
chr6 42258456 42258461 GATA2 JASPAR yes 101704754
chr6 42258462 42258472 NFATC3 JASPAR yes 70364458
chr6 42258462 42258472 NFATC3 JASPAR yes 101704755
chr6 42258463 42258470 NFATC2 JASPAR yes 70364459
chr6 42258463 42258470 NFATC2 JASPAR yes 101704756
chr6 42258468 42258472 YY1 TRANSFAC yes 70364460
chr6 42258468 42258472 YY1 TRANSFAC yes 101704757
chr6 42258468 42258489 IRF1 JASPAR yes 70364461
chr6 42258468 42258489 IRF1 JASPAR yes 101704758
chr6 42258469 42258490 IRF1 JASPAR yes 70364462
chr6 42258469 42258490 IRF1 JASPAR yes 101704759
chr6 42258470 42258485 PRDM1 JASPAR yes 70364463
chr6 42258470 42258485 STAT2 JASPAR yes 70364464
chr6 42258470 42258485 PRDM1 JASPAR yes 101704760
chr6 42258470 42258485 STAT2 JASPAR yes 101704761
chr6 42258471 42258485 SPIC JASPAR yes 70364465
chr6 42258471 42258485 STAT1 JASPAR yes 70364466
chr6 42258471 42258485 SPIC JASPAR yes 101704762
chr6 42258471 42258485 STAT1 JASPAR yes 101704763
chr6 42258472 42258486 SPIC JASPAR yes 70364467
chr6 42258472 42258486 SPIC JASPAR yes 101704764
chr6 42258473 42258494 IRF1 JASPAR yes 70364468
chr6 42258473 42258494 IRF1 JASPAR yes 101704765
chr6 42258474 42258495 IRF1 JASPAR yes 70364469
chr6 42258474 42258495 IRF1 JASPAR yes 101704766
chr6 42258475 42258480 ETS2 TRANSFAC yes 70364470
chr6 42258475 42258480 ETS2 TRANSFAC yes 101704767
chr6 42258475 42258496 IRF1 JASPAR yes 70364471
chr6 42258475 42258496 IRF1 JASPAR yes 101704768
chr6 42258476 42258497 IRF1 JASPAR yes 70364472
chr6 42258476 42258497 IRF1 JASPAR yes 101704769
chr6 42258477 42258492 FOXP1 JASPAR yes 70364473
chr6 42258477 42258492 FOXP1 JASPAR yes 101704770
chr6 42258477 42258498 IRF1 JASPAR yes 70364474
chr6 42258477 42258498 IRF1 JASPAR yes 101704771
chr6 42258478 42258493 FOXP1 JASPAR yes 70364475
chr6 42258478 42258493 FOXP1 JASPAR yes 101704772
chr6 42258478 42258499 IRF1 JASPAR yes 70364476
chr6 42258478 42258499 IRF1 JASPAR yes 101704773
chr6 42258479 42258494 FOXP1 JASPAR yes 70364477
chr6 42258479 42258494 FOXP1 JASPAR yes 101704774
chr6 42258479 42258500 IRF1 JASPAR yes 70364478
chr6 42258479 42258500 IRF1 JASPAR yes 101704775
chr6 42258480 42258495 FOXP1 JASPAR yes 70364479
chr6 42258480 42258495 FOXP1 JASPAR yes 101704776
chr6 42258480 42258501 IRF1 JASPAR yes 70364480
chr6 42258480 42258501 IRF1 JASPAR yes 101704777
chr6 42258481 42258496 FOXP1 JASPAR yes 70364481
chr6 42258481 42258496 FOXP1 JASPAR yes 101704778
chr6 42258481 42258502 IRF1 JASPAR yes 70364482
chr6 42258481 42258502 IRF1 JASPAR yes 101704779
chr6 42258482 42258497 FOXP1 JASPAR yes 70364483
chr6 42258482 42258497 FOXP1 JASPAR yes 101704780
chr6 42258482 42258503 IRF1 JASPAR yes 70364484
chr6 42258482 42258503 IRF1 JASPAR yes 101704781
chr6 42258483 42258498 FOXP1 JASPAR yes 70364485
chr6 42258483 42258498 FOXP1 JASPAR yes 101704782
chr6 42258484 42258499 FOXP1 JASPAR yes 70364486
chr6 42258484 42258499 FOXP1 JASPAR yes 101704783
chr6 42258485 42258500 FOXP1 JASPAR yes 70364487
chr6 42258485 42258500 FOXP1 JASPAR yes 101704784
chr6 42258486 42258501 FOXP1 JASPAR yes 70364488
chr6 42258486 42258501 FOXP1 JASPAR yes 101704785
chr6 42258487 42258502 FOXP1 JASPAR yes 70364489
chr6 42258487 42258502 FOXP1 JASPAR yes 101704786
chr6 42258488 42258503 FOXP1 JASPAR yes 70364490
chr6 42258488 42258503 FOXP1 JASPAR yes 101704787
chr6 42258489 42258504 FOXP1 JASPAR yes 70364491
chr6 42258489 42258504 FOXP1 JASPAR yes 101704788
SNP sites on vista51955[chr6:42258421-42258504]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42258434 rs141368537 C T
IRF1 SCRT1 SCRT2 STAT2
9031483
chr6 42258478 rs12199356 C T
ETS2 FOXP1 IRF1 PRDM1 SPIC STAT1 STAT2
9031484
chr6 42258479 rs552943463 C T
ETS2 FOXP1 IRF1 PRDM1 SPIC STAT1 STAT2
9031485
Genes possibly regulated by vista51955[chr6:42258421-42258504]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 42152139 42162654 - GUCA1B ENSG00000112599.8 42162654 0.77 1.0 6585 4233
chr6 42174539 42185603 - MRPS10 ENSG00000048544.5 42185603 0.51 0.99 6586 27182
Expression level of Genes
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miRNAs possibly regulated by vista51955[chr6:42258421-42258504]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results