EnhancerDB
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  3. vista51956[chr6:42259187-42259201]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51956[chr6:42259187-42259201]
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Tissue distribution of vista51956
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Transcription factor that possibly regulate vista51956[chr6:42259187-42259201]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42259175 42259190 HNF4A JASPAR yes 70364492
chr6 42259175 42259190 HNF4A JASPAR yes 101704875
chr6 42259184 42259205 IRF1 JASPAR yes 70364493
chr6 42259184 42259205 IRF1 JASPAR yes 101704876
chr6 42259186 42259201 FOXP1 JASPAR yes 70364494
chr6 42259186 42259201 FOXP1 JASPAR yes 101704877
chr6 42259187 42259202 FOXP1 JASPAR yes 70364495
chr6 42259187 42259202 FOXP1 JASPAR yes 101704878
chr6 42259188 42259194 TBP TRANSFAC yes 70364496
chr6 42259188 42259194 TBP TRANSFAC yes 101704879
chr6 42259188 42259203 FOXP1 JASPAR yes 70364497
chr6 42259188 42259203 FOXP1 JASPAR yes 101704880
chr6 42259189 42259204 FOXP1 JASPAR yes 70364498
chr6 42259189 42259204 FOXP1 JASPAR yes 101704881
chr6 42259190 42259205 FOXP1 JASPAR yes 70364499
chr6 42259190 42259205 FOXP1 JASPAR yes 101704882
chr6 42259190 42259211 IRF1 JASPAR yes 70364500
chr6 42259190 42259211 IRF1 JASPAR yes 101704883
chr6 42259191 42259206 FOXP1 JASPAR yes 70364501
chr6 42259191 42259206 FOXP1 JASPAR yes 101704884
chr6 42259192 42259207 FOXP1 JASPAR yes 70364502
chr6 42259192 42259207 FOXP1 JASPAR yes 101704885
SNP sites on vista51956[chr6:42259187-42259201]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42259189 rs35745800 TA T
FOXP1 HNF4A IRF1 TBP
9031495
chr6 42259189 rs545724163 TA T
FOXP1 HNF4A IRF1 TBP
9031496
Genes possibly regulated by vista51956[chr6:42259187-42259201]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 42152139 42162654 - GUCA1B ENSG00000112599.8 42162654 0.77 1.0 6585 3467
chr6 42174539 42185603 - MRPS10 ENSG00000048544.5 42185603 0.51 0.99 6586 26416
Expression level of Genes
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miRNAs possibly regulated by vista51956[chr6:42259187-42259201]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results