EnhancerDB
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  3. rs545724163[chr6:42259189]
Enhancers that have rs545724163[chr6:42259189]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42254359 42267679 enh38998
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Stomach
chr6 42259187 42259201 vista51956
VISTA
Transcript factors that have rs545724163[chr6:42259189]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42259175 42259190 HNF4A JASPAR yes 70364492
chr6 42259175 42259190 HNF4A JASPAR yes 101704875
chr6 42259184 42259205 IRF1 JASPAR yes 70364493
chr6 42259184 42259205 IRF1 JASPAR yes 101704876
chr6 42259186 42259201 FOXP1 JASPAR yes 70364494
chr6 42259186 42259201 FOXP1 JASPAR yes 101704877
chr6 42259187 42259202 FOXP1 JASPAR yes 70364495
chr6 42259187 42259202 FOXP1 JASPAR yes 101704878
chr6 42259188 42259194 TBP TRANSFAC yes 70364496
chr6 42259188 42259194 TBP TRANSFAC yes 101704879
chr6 42259188 42259203 FOXP1 JASPAR yes 70364497
chr6 42259188 42259203 FOXP1 JASPAR yes 101704880
chr6 42259189 42259204 FOXP1 JASPAR yes 70364498
chr6 42259189 42259204 FOXP1 JASPAR yes 101704881
Genes associated with rs545724163[chr6:42259189], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More