EnhancerDB
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  3. vista51973[chr6:42369897-42370202]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51973[chr6:42369897-42370202]
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Tissue distribution of vista51973
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Transcription factor that possibly regulate vista51973[chr6:42369897-42370202]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42369857 42370220 STAT1 UCSC Txn Factor no Conserved 108540249
chr6 42369885 42370388 STAT3 UCSC Txn Factor no Conserved 108540250
chr6 42369921 42370364 NFIC UCSC Txn Factor no Conserved 108540251
chr6 42369950 42370317 NFATC1 UCSC Txn Factor no Conserved 108540252
chr6 42369951 42370346 RUNX3 UCSC Txn Factor no Conserved 108540253
chr6 42369977 42370337 BATF UCSC Txn Factor no Conserved 108540254
chr6 42369995 42370307 FOXM1 UCSC Txn Factor no Conserved 108540255
chr6 42370033 42370276 BCL11A UCSC Txn Factor no Conserved 108540256
chr6 42370048 42370291 IRF4 UCSC Txn Factor no Conserved 108540257
chr6 42369885 42369899 SPI1 JASPAR yes 70365106
chr6 42369885 42369899 SPI1 JASPAR yes 101717849
chr6 42369898 42369910 YY1 JASPAR yes 70365107
chr6 42369898 42369910 YY1 JASPAR yes 101717850
chr6 42369901 42369907 YY1 JASPAR yes 70365108
chr6 42369901 42369907 YY1 JASPAR yes 101717851
chr6 42369939 42369957 SRF JASPAR yes 70365109
chr6 42369939 42369957 SRF JASPAR yes 101717852
chr6 42369941 42369952 CDX2 JASPAR yes 70365110
chr6 42369941 42369952 CDX2 JASPAR yes 101717853
chr6 42369942 42369953 HOXA10 JASPAR yes 70365111
chr6 42369942 42369953 HOXA10 JASPAR yes 101717854
chr6 42369942 42369954 SRF JASPAR yes 70365112
chr6 42369942 42369954 SRF JASPAR yes 101717855
chr6 42369943 42369952 CDX1 JASPAR yes 70365113
chr6 42369943 42369952 CDX1 JASPAR yes 101717856
chr6 42369943 42369953 HOXA13 JASPAR yes 70365114
chr6 42369943 42369953 HOXB13 JASPAR yes 70365115
chr6 42369943 42369953 HOXD13 JASPAR yes 70365116
chr6 42369943 42369953 HOXA13 JASPAR yes 101717857
chr6 42369943 42369953 HOXB13 JASPAR yes 101717858
chr6 42369943 42369953 HOXD13 JASPAR yes 101717859
chr6 42369974 42369986 TFAP2A JASPAR yes 70365117
chr6 42369974 42369986 TFAP2B JASPAR yes 70365118
chr6 42369974 42369986 TFAP2A JASPAR yes 101717860
chr6 42369974 42369986 TFAP2B JASPAR yes 101717861
chr6 42369974 42369989 TFAP2A JASPAR yes 70365119
chr6 42369974 42369989 TFAP2C JASPAR yes 70365120
chr6 42369974 42369989 TFAP2A JASPAR yes 101717862
chr6 42369974 42369989 TFAP2C JASPAR yes 101717863
chr6 42369975 42369986 TFAP2A JASPAR yes 70365121
chr6 42369975 42369986 TFAP2B JASPAR yes 70365122
chr6 42369975 42369986 TFAP2C JASPAR yes 70365123
chr6 42369975 42369986 TFAP2A JASPAR yes 101717864
chr6 42369975 42369986 TFAP2B JASPAR yes 101717865
chr6 42369975 42369986 TFAP2C JASPAR yes 101717866
chr6 42369980 42369990 SP1 JASPAR yes 70365124
chr6 42369980 42369990 SP1 JASPAR yes 101717867
chr6 42370010 42370014 NFE TRANSFAC yes 70365125
chr6 42370010 42370014 NFE TRANSFAC yes 101717868
chr6 42370036 42370045 HIC2 JASPAR yes 70365126
chr6 42370036 42370045 HIC2 JASPAR yes 101717869
chr6 42370039 42370043 LFA1 TRANSFAC yes 70365127
chr6 42370039 42370043 LFA1 TRANSFAC yes 101717870
chr6 42370051 42370066 STAT1 JASPAR yes 70365128
chr6 42370051 42370066 STAT1 JASPAR yes 101717871
chr6 42370053 42370064 STAT1 JASPAR yes 70365129
chr6 42370053 42370064 STAT1 JASPAR yes 101717872
chr6 42370060 42370081 MAFG JASPAR yes 70365130
chr6 42370060 42370081 MAFG JASPAR yes 101717873
chr6 42370061 42370075 JUN JASPAR yes 70365131
chr6 42370061 42370075 JUN JASPAR yes 101717874
chr6 42370064 42370075 FOSL2 JASPAR yes 70365132
chr6 42370064 42370075 JUNB JASPAR yes 70365133
chr6 42370064 42370075 FOSL2 JASPAR yes 101717875
chr6 42370064 42370075 JUNB JASPAR yes 101717876
chr6 42370065 42370076 FOS JASPAR yes 70365134
chr6 42370065 42370076 FOSL1 JASPAR yes 70365135
chr6 42370065 42370076 JUND JASPAR yes 70365136
chr6 42370065 42370076 NFE2 JASPAR yes 70365137
chr6 42370065 42370076 FOS JASPAR yes 101717877
chr6 42370065 42370076 FOSL1 JASPAR yes 101717878
chr6 42370065 42370076 JUND JASPAR yes 101717879
chr6 42370065 42370076 NFE2 JASPAR yes 101717880
chr6 42370066 42370073 JUN TRANSFAC yes 70365138
chr6 42370066 42370073 JUN TRANSFAC yes 101717881
chr6 42370066 42370075 JDP2 JASPAR yes 70365139
chr6 42370066 42370075 JDP2 JASPAR yes 101717882
chr6 42370066 42370077 FOSL2 JASPAR yes 70365140
chr6 42370066 42370077 JUNB JASPAR yes 70365141
chr6 42370066 42370077 FOSL2 JASPAR yes 101717883
chr6 42370066 42370077 JUNB JASPAR yes 101717884
chr6 42370066 42370080 JUN JASPAR yes 70365142
chr6 42370066 42370080 JUN JASPAR yes 101717885
chr6 42370067 42370078 BATF JASPAR yes 70365143
chr6 42370067 42370078 BATF JASPAR yes 101717886
chr6 42370098 42370110 TEF JASPAR yes 70365144
chr6 42370098 42370110 TEF JASPAR yes 101717887
chr6 42370100 42370111 PHOX2A JASPAR yes 70365145
chr6 42370100 42370111 PROP1 JASPAR yes 70365146
chr6 42370100 42370111 PHOX2A JASPAR yes 101717888
chr6 42370100 42370111 PROP1 JASPAR yes 101717889
chr6 42370106 42370120 SPI1 JASPAR yes 70365147
chr6 42370106 42370120 SPI1 JASPAR yes 101717890
chr6 42370126 42370132 ZNF354C JASPAR yes 70365148
chr6 42370126 42370132 ZNF354C JASPAR yes 101717891
chr6 42370128 42370142 TCF7L2 JASPAR yes 70365149
chr6 42370128 42370142 TCF7L2 JASPAR yes 101717892
chr6 42370128 42370143 LEF1 JASPAR yes 70365150
chr6 42370128 42370143 LEF1 JASPAR yes 101717893
chr6 42370129 42370150 IRF1 JASPAR yes 70365151
chr6 42370129 42370150 IRF1 JASPAR yes 101717894
chr6 42370131 42370146 IRF9 JASPAR yes 70365152
chr6 42370131 42370146 IRF9 JASPAR yes 101717895
chr6 42370132 42370138 TCF4 TRANSFAC yes 70365153
chr6 42370132 42370138 TCF4 TRANSFAC yes 101717896
chr6 42370132 42370146 IRF7 JASPAR yes 70365154
chr6 42370132 42370146 IRF8 JASPAR yes 70365155
chr6 42370132 42370146 IRF7 JASPAR yes 101717897
chr6 42370132 42370146 IRF8 JASPAR yes 101717898
chr6 42370133 42370148 STAT2 JASPAR yes 70365156
chr6 42370133 42370148 STAT2 JASPAR yes 101717899
chr6 42370167 42370188 IRF1 JASPAR yes 70365157
chr6 42370167 42370188 IRF1 JASPAR yes 101717900
chr6 42370170 42370184 IRF8 JASPAR yes 70365158
chr6 42370170 42370184 IRF8 JASPAR yes 101717901
chr6 42370197 42370212 MAFK JASPAR yes 70365159
chr6 42370197 42370212 MAFK JASPAR yes 101717902
chr6 42370201 42370212 NRL JASPAR yes 70365160
chr6 42370201 42370212 NRL JASPAR yes 101717903
SNP sites on vista51973[chr6:42369897-42370202]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42370201 rs180930398 C T
BATF BCL11A FOXM1 IRF4 MAFK NFATC1 NFIC NRL RUNX3 STAT1 STAT3
9032624
Genes possibly regulated by vista51973[chr6:42369897-42370202]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 42192669 42419789 - TRERF1 ENSG00000124496.8 42419789 0.66 1.0 6587 50413
Expression level of Genes
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miRNAs possibly regulated by vista51973[chr6:42369897-42370202]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results