EnhancerDB
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  3. rs180930398[chr6:42370201]
Enhancers that have rs180930398[chr6:42370201]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42360825 42379595 enh9117
Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr6 42369897 42370202 vista51973
VISTA
Transcript factors that have rs180930398[chr6:42370201]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42369857 42370220 STAT1 UCSC Txn Factor no Conserved 108540249
chr6 42369885 42370388 STAT3 UCSC Txn Factor no Conserved 108540250
chr6 42369921 42370364 NFIC UCSC Txn Factor no Conserved 108540251
chr6 42369950 42370317 NFATC1 UCSC Txn Factor no Conserved 108540252
chr6 42369951 42370346 RUNX3 UCSC Txn Factor no Conserved 108540253
chr6 42369977 42370337 BATF UCSC Txn Factor no Conserved 108540254
chr6 42369995 42370307 FOXM1 UCSC Txn Factor no Conserved 108540255
chr6 42370033 42370276 BCL11A UCSC Txn Factor no Conserved 108540256
chr6 42370048 42370291 IRF4 UCSC Txn Factor no Conserved 108540257
chr6 42370197 42370212 MAFK JASPAR yes 70365159
chr6 42370197 42370212 MAFK JASPAR yes 101717902
chr6 42370201 42370212 NRL JASPAR yes 70365160
chr6 42370201 42370212 NRL JASPAR yes 101717903
Genes associated with rs180930398[chr6:42370201], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More