EnhancerDB
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  3. vista51974[chr6:42371710-42371838]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51974[chr6:42371710-42371838]
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Tissue distribution of vista51974
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Transcription factor that possibly regulate vista51974[chr6:42371710-42371838]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42371681 42371974 NR3C1 UCSC Txn Factor no Conserved 108540258
chr6 42371714 42371730 T JASPAR yes 70365161
chr6 42371714 42371730 T JASPAR yes 101718142
chr6 42371720 42371735 RFX5 JASPAR yes 70365162
chr6 42371720 42371735 RFX5 JASPAR yes 101718143
chr6 42371722 42371735 SMAD2 JASPAR yes 70365163
chr6 42371722 42371735 SMAD2 JASPAR yes 101718144
chr6 42371740 42371744 LFA1 TRANSFAC yes 70365164
chr6 42371740 42371744 LFA1 TRANSFAC yes 101718145
chr6 42371761 42371779 NFYA JASPAR yes 70365165
chr6 42371761 42371779 NFYA JASPAR yes 101718146
chr6 42371771 42371788 RXRA JASPAR yes 70365166
chr6 42371771 42371788 RXRA JASPAR yes 101718147
chr6 42371784 42371794 SP1 JASPAR yes 70365167
chr6 42371784 42371794 SP1 JASPAR yes 101718148
chr6 42371790 42371799 ZEB1 JASPAR yes 70365168
chr6 42371790 42371799 ZEB1 JASPAR yes 101718149
chr6 42371791 42371801 TCF3 JASPAR yes 70365169
chr6 42371791 42371801 TCF4 JASPAR yes 70365170
chr6 42371791 42371801 TCF3 JASPAR yes 101718150
chr6 42371791 42371801 TCF4 JASPAR yes 101718151
chr6 42371792 42371801 SNAI2 JASPAR yes 70365171
chr6 42371792 42371801 SNAI2 JASPAR yes 101718152
chr6 42371793 42371798 USF2 TRANSFAC yes 70365172
chr6 42371793 42371798 USF2 TRANSFAC yes 101718153
chr6 42371796 42371816 TP63 JASPAR yes 70365173
chr6 42371796 42371816 TP63 JASPAR yes 101718154
chr6 42371797 42371815 TP63 JASPAR yes 70365174
chr6 42371797 42371815 TP73 JASPAR yes 70365175
chr6 42371797 42371815 TP63 JASPAR yes 101718155
chr6 42371797 42371815 TP73 JASPAR yes 101718156
chr6 42371804 42371819 AR JASPAR yes 70365176
chr6 42371804 42371819 AR JASPAR yes 101718157
chr6 42371804 42371821 NR3C1 JASPAR yes 70365177
chr6 42371804 42371821 NR3C2 JASPAR yes 70365178
chr6 42371804 42371821 NR3C1 JASPAR yes 101718158
chr6 42371804 42371821 NR3C2 JASPAR yes 101718159
chr6 42371806 42371821 AR JASPAR yes 70365179
chr6 42371806 42371821 AR JASPAR yes 101718160
SNP sites on vista51974[chr6:42371710-42371838]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42371725 rs538981313 G C
NR3C1 RFX5 SMAD2 T
9032644
chr6 42371763 rs150260729 C T
NFYA NR3C1
9032645
chr6 42371771 rs187811229 C T
NFYA NR3C1 RXRA
9032646
chr6 42371810 rs538813876 CA C
AR NR3C1 NR3C2 TP63 TP73
9032647
Genes possibly regulated by vista51974[chr6:42371710-42371838]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 42192669 42419789 - TRERF1 ENSG00000124496.8 42419789 0.66 1.0 6587 52049
Expression level of Genes
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miRNAs possibly regulated by vista51974[chr6:42371710-42371838]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results