EnhancerDB
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  3. rs538981313[chr6:42371725]
Enhancers that have rs538981313[chr6:42371725]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42360825 42379595 enh9117
Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr6 42371710 42371838 vista51974
VISTA
Transcript factors that have rs538981313[chr6:42371725]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42371681 42371974 NR3C1 UCSC Txn Factor no Conserved 108540258
chr6 42371714 42371730 T JASPAR yes 70365161
chr6 42371714 42371730 T JASPAR yes 101718142
chr6 42371720 42371735 RFX5 JASPAR yes 70365162
chr6 42371720 42371735 RFX5 JASPAR yes 101718143
chr6 42371722 42371735 SMAD2 JASPAR yes 70365163
chr6 42371722 42371735 SMAD2 JASPAR yes 101718144
Genes associated with rs538981313[chr6:42371725], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More