EnhancerDB
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  3. vista51975[chr6:42372266-42372455]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51975[chr6:42372266-42372455]
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Tissue distribution of vista51975
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Transcription factor that possibly regulate vista51975[chr6:42372266-42372455]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 42372171 42372675 TCF7L2 UCSC Txn Factor no Conserved 108540259
chr6 42372218 42372451 TFAP2C UCSC Txn Factor no Conserved 108540260
chr6 42372317 42372332 TFAP2A JASPAR yes 70365180
chr6 42372317 42372332 TFAP2C JASPAR yes 70365181
chr6 42372317 42372332 TFAP2A JASPAR yes 101718221
chr6 42372317 42372332 TFAP2C JASPAR yes 101718222
chr6 42372319 42372334 TFAP2C JASPAR yes 70365182
chr6 42372319 42372334 TFAP2C JASPAR yes 101718223
chr6 42372325 42372339 PLAG1 JASPAR yes 70365183
chr6 42372325 42372339 PLAG1 JASPAR yes 101718224
chr6 42372334 42372345 FOSL2 JASPAR yes 70365184
chr6 42372334 42372345 JUNB JASPAR yes 70365185
chr6 42372334 42372345 FOSL2 JASPAR yes 101718225
chr6 42372334 42372345 JUNB JASPAR yes 101718226
chr6 42372335 42372346 FOS JASPAR yes 70365186
chr6 42372335 42372346 JUND JASPAR yes 70365187
chr6 42372335 42372346 FOS JASPAR yes 101718227
chr6 42372335 42372346 JUND JASPAR yes 101718228
chr6 42372351 42372354 MYB TRANSFAC yes 70365188
chr6 42372351 42372354 MYB TRANSFAC yes 101718229
chr6 42372356 42372360 NFE TRANSFAC yes 70365189
chr6 42372356 42372360 NFE TRANSFAC yes 101718230
chr6 42372377 42372391 POU1F1 JASPAR yes 70365190
chr6 42372377 42372391 POU1F1 JASPAR yes 101718231
chr6 42372379 42372383 YY1 TRANSFAC yes 70365191
chr6 42372379 42372383 YY1 TRANSFAC yes 101718232
chr6 42372380 42372388 FEV JASPAR yes 70365192
chr6 42372380 42372388 FEV JASPAR yes 101718233
chr6 42372382 42372387 ETS2 TRANSFAC yes 70365193
chr6 42372382 42372387 ETS2 TRANSFAC yes 101718234
chr6 42372387 42372392 GATA2 JASPAR yes 70365194
chr6 42372387 42372392 GATA2 JASPAR yes 101718235
chr6 42372393 42372403 SREBF1 JASPAR yes 70365195
chr6 42372393 42372403 SREBF2 JASPAR yes 70365196
chr6 42372393 42372403 SREBF1 JASPAR yes 101718236
chr6 42372393 42372403 SREBF2 JASPAR yes 101718237
chr6 42372405 42372410 GATA2 JASPAR yes 70365197
chr6 42372405 42372410 GATA2 JASPAR yes 101718238
chr6 42372411 42372432 ZNF263 JASPAR yes 70365198
chr6 42372411 42372432 ZNF263 JASPAR yes 101718239
chr6 42372432 42372447 MYBL2 JASPAR yes 70365199
chr6 42372432 42372447 MYBL2 JASPAR yes 101718240
chr6 42372439 42372442 MYB TRANSFAC yes 70365200
chr6 42372439 42372442 MYB TRANSFAC yes 101718241
SNP sites on vista51975[chr6:42372266-42372455]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 42372357 rs1397175 C A
NFE TCF7L2 TFAP2C
9032650
chr6 42372402 rs260285 A G
SREBF1 SREBF2 TCF7L2 TFAP2C
9032651
chr6 42372453 rs146729751 TGCCG T
TCF7L2
9032652
Genes possibly regulated by vista51975[chr6:42372266-42372455]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 42192669 42419789 - TRERF1 ENSG00000124496.8 42419789 0.66 1.0 6587 52666
Expression level of Genes
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miRNAs possibly regulated by vista51975[chr6:42372266-42372455]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results