EnhancerDB
  1. Home
  2. SNP
  3. rs260285[chr6:42372402]
Enhancers that have rs260285[chr6:42372402]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42360825 42379595 enh9117
Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr6 42372266 42372455 vista51975
VISTA
Transcript factors that have rs260285[chr6:42372402]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42372171 42372675 TCF7L2 UCSC Txn Factor no Conserved 108540259
chr6 42372218 42372451 TFAP2C UCSC Txn Factor no Conserved 108540260
chr6 42372393 42372403 SREBF1 JASPAR yes 70365195
chr6 42372393 42372403 SREBF2 JASPAR yes 70365196
chr6 42372393 42372403 SREBF1 JASPAR yes 101718236
chr6 42372393 42372403 SREBF2 JASPAR yes 101718237
Genes associated with rs260285[chr6:42372402], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More