EnhancerDB
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  3. vista52[chr1:1840449-1840835]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52[chr1:1840449-1840835]
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Tissue distribution of vista52
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Transcription factor that possibly regulate vista52[chr1:1840449-1840835]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 1840458 1840464 MZF1 JASPAR yes 26213096
chr1 1840458 1840464 MZF1 JASPAR yes 118215526
chr1 1840478 1840497 CTCF JASPAR yes 26213097
chr1 1840478 1840497 CTCF JASPAR yes 118215527
chr1 1840512 1840524 CREB1 JASPAR yes 26213098
chr1 1840512 1840524 CREB1 JASPAR yes 118215528
chr1 1840514 1840527 ATF4 JASPAR yes 26213099
chr1 1840514 1840527 ATF4 JASPAR yes 118215529
chr1 1840517 1840525 CREB1 JASPAR yes 26213100
chr1 1840517 1840525 CREB1 JASPAR yes 118215530
chr1 1840526 1840531 SP1 TRANSFAC yes 26213101
chr1 1840526 1840531 SP1 TRANSFAC yes 118215531
chr1 1840530 1840549 REST JASPAR yes 26213102
chr1 1840530 1840549 REST JASPAR yes 118215532
chr1 1840539 1840550 NFKB1 JASPAR yes 26213103
chr1 1840539 1840550 NFKB1 JASPAR yes 118215533
chr1 1840543 1840548 SP1 TRANSFAC yes 26213104
chr1 1840543 1840548 SP1 TRANSFAC yes 118215534
chr1 1840543 1840549 SP1 TRANSFAC yes 26213105
chr1 1840543 1840549 SP1 TRANSFAC yes 118215535
chr1 1840567 1840586 CTCF JASPAR yes 26213106
chr1 1840567 1840586 CTCF JASPAR yes 118215536
chr1 1840574 1840588 E2F7 JASPAR yes 26213107
chr1 1840574 1840588 E2F7 JASPAR yes 118215537
chr1 1840575 1840587 E2F8 JASPAR yes 26213108
chr1 1840575 1840587 E2F8 JASPAR yes 118215538
chr1 1840578 1840583 SP1 TRANSFAC yes 26213109
chr1 1840578 1840583 SP1 TRANSFAC yes 118215539
chr1 1840595 1840601 ETS1 JASPAR yes 26213110
chr1 1840595 1840601 SPI1 JASPAR yes 26213111
chr1 1840595 1840601 ETS1 JASPAR yes 118215540
chr1 1840595 1840601 SPI1 JASPAR yes 118215541
chr1 1840604 1840614 SP1 JASPAR yes 26213112
chr1 1840604 1840614 SP1 JASPAR yes 118215542
chr1 1840605 1840613 SP1 TRANSFAC yes 26213113
chr1 1840605 1840613 SP1 TRANSFAC yes 118215543
chr1 1840605 1840614 SP1 TRANSFAC yes 26213114
chr1 1840605 1840614 SP1 TRANSFAC yes 118215544
chr1 1840606 1840611 SP1 TRANSFAC yes 26213115
chr1 1840606 1840611 SP1 TRANSFAC yes 118215545
chr1 1840607 1840612 SP1 TRANSFAC yes 26213116
chr1 1840607 1840612 SP1 TRANSFAC yes 118215546
chr1 1840607 1840613 SP1 TRANSFAC yes 26213117
chr1 1840607 1840613 SP1 TRANSFAC yes 118215547
chr1 1840616 1840626 FIGLA JASPAR yes 26213118
chr1 1840616 1840626 TCF4 JASPAR yes 26213119
chr1 1840616 1840626 FIGLA JASPAR yes 118215548
chr1 1840616 1840626 TCF4 JASPAR yes 118215549
chr1 1840618 1840627 ZEB1 JASPAR yes 26213120
chr1 1840618 1840627 ZEB1 JASPAR yes 118215550
chr1 1840620 1840625 SP1 TRANSFAC yes 26213121
chr1 1840620 1840625 SP1 TRANSFAC yes 118215551
chr1 1840622 1840632 SP1 JASPAR yes 26213122
chr1 1840622 1840632 SP1 JASPAR yes 118215552
chr1 1840623 1840631 SP1 TRANSFAC yes 26213123
chr1 1840623 1840631 SP1 TRANSFAC yes 118215553
chr1 1840623 1840632 SP1 TRANSFAC yes 26213124
chr1 1840623 1840632 SP1 TRANSFAC yes 118215554
chr1 1840624 1840629 SP1 TRANSFAC yes 26213125
chr1 1840624 1840629 SP1 TRANSFAC yes 118215555
chr1 1840625 1840630 SP1 TRANSFAC yes 26213126
chr1 1840625 1840630 SP1 TRANSFAC yes 118215556
chr1 1840625 1840631 SP1 TRANSFAC yes 26213127
chr1 1840625 1840631 SP1 TRANSFAC yes 118215557
chr1 1840628 1840633 SP1 TRANSFAC yes 26213128
chr1 1840628 1840633 SP1 TRANSFAC yes 118215558
chr1 1840641 1840646 SP1 TRANSFAC yes 26213129
chr1 1840641 1840646 SP1 TRANSFAC yes 118215559
chr1 1840644 1840652 SP1 TRANSFAC yes 26213130
chr1 1840644 1840652 SP1 TRANSFAC yes 118215560
chr1 1840645 1840650 SP1 TRANSFAC yes 26213131
chr1 1840645 1840650 SP1 TRANSFAC yes 118215561
chr1 1840646 1840651 SP1 TRANSFAC yes 26213132
chr1 1840646 1840651 SP1 TRANSFAC yes 118215562
chr1 1840657 1840662 SP1 TRANSFAC yes 26213133
chr1 1840657 1840662 SP1 TRANSFAC yes 118215563
chr1 1840658 1840663 SP1 TRANSFAC yes 26213134
chr1 1840658 1840663 SP1 TRANSFAC yes 118215564
chr1 1840660 1840674 PLAG1 JASPAR yes 26213135
chr1 1840660 1840674 PLAG1 JASPAR yes 118215565
chr1 1840661 1840676 ZIC3 JASPAR yes 26213136
chr1 1840661 1840676 ZIC4 JASPAR yes 26213137
chr1 1840661 1840676 ZIC3 JASPAR yes 118215566
chr1 1840661 1840676 ZIC4 JASPAR yes 118215567
chr1 1840661 1840681 RREB1 JASPAR yes 26213138
chr1 1840661 1840681 RREB1 JASPAR yes 118215568
chr1 1840662 1840676 GLIS2 JASPAR yes 26213139
chr1 1840662 1840676 GLIS2 JASPAR yes 118215569
chr1 1840666 1840676 SP1 JASPAR yes 26213140
chr1 1840666 1840676 ZNF740 JASPAR yes 26213141
chr1 1840666 1840676 SP1 JASPAR yes 118215570
chr1 1840666 1840676 ZNF740 JASPAR yes 118215571
chr1 1840667 1840677 SP1 JASPAR yes 26213142
chr1 1840667 1840677 ZNF740 JASPAR yes 26213143
chr1 1840667 1840677 SP1 JASPAR yes 118215572
chr1 1840667 1840677 ZNF740 JASPAR yes 118215573
chr1 1840668 1840678 SP1 JASPAR yes 26213144
chr1 1840668 1840678 ZNF740 JASPAR yes 26213145
chr1 1840668 1840678 SP1 JASPAR yes 118215574
chr1 1840668 1840678 ZNF740 JASPAR yes 118215575
chr1 1840669 1840679 SP1 JASPAR yes 26213146
chr1 1840669 1840679 ZNF740 JASPAR yes 26213147
chr1 1840669 1840679 SP1 JASPAR yes 118215576
chr1 1840669 1840679 ZNF740 JASPAR yes 118215577
chr1 1840670 1840680 SP1 JASPAR yes 26213148
chr1 1840670 1840680 ZNF740 JASPAR yes 26213149
chr1 1840670 1840680 SP1 JASPAR yes 118215578
chr1 1840670 1840680 ZNF740 JASPAR yes 118215579
chr1 1840671 1840681 SP1 JASPAR yes 26213150
chr1 1840671 1840681 ZNF740 JASPAR yes 26213151
chr1 1840671 1840681 SP1 JASPAR yes 118215580
chr1 1840671 1840681 ZNF740 JASPAR yes 118215581
chr1 1840672 1840682 SP1 JASPAR yes 26213152
chr1 1840672 1840682 ZNF740 JASPAR yes 26213153
chr1 1840672 1840682 SP1 JASPAR yes 118215582
chr1 1840672 1840682 ZNF740 JASPAR yes 118215583
chr1 1840673 1840683 SP1 JASPAR yes 26213154
chr1 1840673 1840683 ZNF740 JASPAR yes 26213155
chr1 1840673 1840683 SP1 JASPAR yes 118215584
chr1 1840673 1840683 ZNF740 JASPAR yes 118215585
chr1 1840677 1840687 ETV6 JASPAR yes 26213156
chr1 1840677 1840687 ETV6 JASPAR yes 118215586
chr1 1840679 1840684 ETS2 TRANSFAC yes 26213157
chr1 1840679 1840684 ETS2 TRANSFAC yes 118215587
chr1 1840680 1840699 PAX5 JASPAR yes 26213158
chr1 1840680 1840699 PAX5 JASPAR yes 118215588
chr1 1840724 1840734 SP1 JASPAR yes 26213159
chr1 1840724 1840734 SP1 JASPAR yes 118215589
chr1 1840725 1840733 SP1 TRANSFAC yes 26213160
chr1 1840725 1840733 SP1 TRANSFAC yes 118215590
chr1 1840725 1840734 SP1 TRANSFAC yes 26213161
chr1 1840725 1840734 SP1 TRANSFAC yes 118215591
chr1 1840726 1840731 SP1 TRANSFAC yes 26213162
chr1 1840726 1840731 SP1 TRANSFAC yes 118215592
chr1 1840727 1840732 SP1 TRANSFAC yes 26213163
chr1 1840727 1840732 SP1 TRANSFAC yes 118215593
chr1 1840727 1840733 SP1 TRANSFAC yes 26213164
chr1 1840727 1840733 SP1 TRANSFAC yes 118215594
chr1 1840730 1840735 SP1 TRANSFAC yes 26213165
chr1 1840730 1840735 SP1 TRANSFAC yes 118215595
chr1 1840730 1840737 SP1 TRANSFAC yes 26213166
chr1 1840730 1840737 SP1 TRANSFAC yes 118215596
chr1 1840730 1840750 ESR1 JASPAR yes 26213167
chr1 1840730 1840750 ESR1 JASPAR yes 118215597
chr1 1840744 1840755 NFKB1 JASPAR yes 26213168
chr1 1840744 1840755 NFKB1 JASPAR yes 118215598
chr1 1840751 1840757 SP1 TRANSFAC yes 26213169
chr1 1840751 1840757 SP1 TRANSFAC yes 118215599
chr1 1840761 1840767 SP1 TRANSFAC yes 26213170
chr1 1840761 1840767 SP1 TRANSFAC yes 118215600
chr1 1840761 1840771 SP1 JASPAR yes 26213171
chr1 1840761 1840771 SP1 JASPAR yes 118215601
chr1 1840813 1840827 CREB3 JASPAR yes 26213172
chr1 1840813 1840827 CREB3L1 JASPAR yes 26213173
chr1 1840813 1840827 CREB3 JASPAR yes 118215602
chr1 1840813 1840827 CREB3L1 JASPAR yes 118215603
chr1 1840814 1840824 MAX JASPAR yes 26213174
chr1 1840814 1840824 MAX JASPAR yes 118215604
chr1 1840815 1840825 MLXIPL JASPAR yes 26213175
chr1 1840815 1840825 MLX JASPAR yes 26213176
chr1 1840815 1840825 MNT JASPAR yes 26213177
chr1 1840815 1840825 TFE3 JASPAR yes 26213178
chr1 1840815 1840825 MLXIPL JASPAR yes 118215605
chr1 1840815 1840825 MLX JASPAR yes 118215606
chr1 1840815 1840825 MNT JASPAR yes 118215607
chr1 1840815 1840825 TFE3 JASPAR yes 118215608
chr1 1840816 1840823 USF1 JASPAR yes 26213179
chr1 1840816 1840823 USF1 JASPAR yes 118215609
chr1 1840817 1840822 MYC TRANSFAC yes 26213180
chr1 1840817 1840822 USF1 TRANSFAC yes 26213181
chr1 1840817 1840822 USF2 TRANSFAC yes 26213182
chr1 1840817 1840822 MYC TRANSFAC yes 118215610
chr1 1840817 1840822 USF1 TRANSFAC yes 118215611
chr1 1840817 1840822 USF2 TRANSFAC yes 118215612
chr1 1840824 1840829 ATF1 TRANSFAC yes 26213183
chr1 1840824 1840829 ATF1 TRANSFAC yes 118215613
SNP sites on vista52[chr1:1840449-1840835]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 1840514 rs751993 G A,C
ATF4 CREB1
9990
chr1 1840574 rs558518607 C G
CTCF E2F7
9991
chr1 1840576 rs376869495 T C
CTCF E2F7 E2F8
9992
chr1 1840606 rs941529 G A
SP1
9993
chr1 1840635 rs574118922 G T no 9994
chr1 1840637 rs539896608 G C no 9995
chr1 1840673 rs28651112 G A,T
GLIS2 PLAG1 RREB1 SP1 ZIC3 ZIC4 ZNF740
9996
chr1 1840677 rs4298676 G A
ETV6 RREB1 SP1 ZNF740
9997
chr1 1840769 rs548616465 G A
SP1
9998
chr1 1840805 rs527688822 C T no 9999
Genes possibly regulated by vista52[chr1:1840449-1840835]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 1716729 1822495 - GNB1 ENSG00000078369.13 1822495 0.7 1.0 52 82046
chr1 1846266 1848735 + CALML6 ENSG00000169885.5 1846266 0.87 1.0 53 94569
chr1 1849029 1850712 - TMEM52 ENSG00000178821.8 1850712 0.99 1.0 54 90123
chr1 1853396 1935276 - C1orf222 ENSG00000142609.13 1935276 0.98 1.0 55 5559
Expression level of Genes
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miRNAs possibly regulated by vista52[chr1:1840449-1840835]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results