EnhancerDB
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  3. rs28651112[chr1:1840673]
Enhancers that have rs28651112[chr1:1840673]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1835043 1841115 enh8
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Thymus Epithelial (MCF-7)
chr1 1840449 1840835 vista52
VISTA
Transcript factors that have rs28651112[chr1:1840673]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1839428 1841104 ZNF274 GTRD no Blood (GM12878) 107801802
chr1 1840660 1840674 PLAG1 JASPAR yes 26213135
chr1 1840660 1840674 PLAG1 JASPAR yes 118215565
chr1 1840661 1840676 ZIC3 JASPAR yes 26213136
chr1 1840661 1840676 ZIC4 JASPAR yes 26213137
chr1 1840661 1840676 ZIC3 JASPAR yes 118215566
chr1 1840661 1840676 ZIC4 JASPAR yes 118215567
chr1 1840661 1840681 RREB1 JASPAR yes 26213138
chr1 1840661 1840681 RREB1 JASPAR yes 118215568
chr1 1840662 1840676 GLIS2 JASPAR yes 26213139
chr1 1840662 1840676 GLIS2 JASPAR yes 118215569
chr1 1840666 1840676 SP1 JASPAR yes 26213140
chr1 1840666 1840676 ZNF740 JASPAR yes 26213141
chr1 1840666 1840676 SP1 JASPAR yes 118215570
chr1 1840666 1840676 ZNF740 JASPAR yes 118215571
chr1 1840667 1840677 SP1 JASPAR yes 26213142
chr1 1840667 1840677 ZNF740 JASPAR yes 26213143
chr1 1840667 1840677 SP1 JASPAR yes 118215572
chr1 1840667 1840677 ZNF740 JASPAR yes 118215573
chr1 1840668 1840678 SP1 JASPAR yes 26213144
chr1 1840668 1840678 ZNF740 JASPAR yes 26213145
chr1 1840668 1840678 SP1 JASPAR yes 118215574
chr1 1840668 1840678 ZNF740 JASPAR yes 118215575
chr1 1840669 1840679 SP1 JASPAR yes 26213146
chr1 1840669 1840679 ZNF740 JASPAR yes 26213147
chr1 1840669 1840679 SP1 JASPAR yes 118215576
chr1 1840669 1840679 ZNF740 JASPAR yes 118215577
chr1 1840670 1840680 SP1 JASPAR yes 26213148
chr1 1840670 1840680 ZNF740 JASPAR yes 26213149
chr1 1840670 1840680 SP1 JASPAR yes 118215578
chr1 1840670 1840680 ZNF740 JASPAR yes 118215579
chr1 1840671 1840681 SP1 JASPAR yes 26213150
chr1 1840671 1840681 ZNF740 JASPAR yes 26213151
chr1 1840671 1840681 SP1 JASPAR yes 118215580
chr1 1840671 1840681 ZNF740 JASPAR yes 118215581
chr1 1840672 1840682 SP1 JASPAR yes 26213152
chr1 1840672 1840682 ZNF740 JASPAR yes 26213153
chr1 1840672 1840682 SP1 JASPAR yes 118215582
chr1 1840672 1840682 ZNF740 JASPAR yes 118215583
chr1 1840673 1840683 SP1 JASPAR yes 26213154
chr1 1840673 1840683 ZNF740 JASPAR yes 26213155
chr1 1840673 1840683 SP1 JASPAR yes 118215584
chr1 1840673 1840683 ZNF740 JASPAR yes 118215585
Genes associated with rs28651112[chr1:1840673], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More