EnhancerDB
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  3. vista52015[chr6:43635973-43636240]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52015[chr6:43635973-43636240]
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Tissue distribution of vista52015
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Transcription factor that possibly regulate vista52015[chr6:43635973-43636240]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 43634860 43638093 POLR2A UCSC Txn Factor no Conserved 108540310
chr6 43634860 43638093 POLR2A UCSC Txn Factor no Conserved 108540311
chr6 43636014 43636616 CTCF UCSC Txn Factor no Conserved 108540312
chr6 43635965 43635979 RORA JASPAR yes 70367097
chr6 43635965 43635979 RORA JASPAR yes 101773709
chr6 43635980 43635988 MEIS2 JASPAR yes 70367098
chr6 43635980 43635988 MEIS3 JASPAR yes 70367099
chr6 43635980 43635988 MEIS2 JASPAR yes 101773710
chr6 43635980 43635988 MEIS3 JASPAR yes 101773711
chr6 43636037 43636056 RFX2 JASPAR yes 70367100
chr6 43636037 43636056 RFX2 JASPAR yes 101773712
chr6 43636041 43636057 RFX4 JASPAR yes 70367101
chr6 43636041 43636057 RFX4 JASPAR yes 101773713
chr6 43636042 43636061 RFX2 JASPAR yes 70367102
chr6 43636042 43636061 RFX2 JASPAR yes 101773714
chr6 43636053 43636065 NHLH1 JASPAR yes 70367103
chr6 43636053 43636065 NHLH1 JASPAR yes 101773715
chr6 43636054 43636064 TFAP4 JASPAR yes 70367104
chr6 43636054 43636064 TFAP4 JASPAR yes 101773716
chr6 43636089 43636097 MEIS3 JASPAR yes 70367105
chr6 43636089 43636097 MEIS3 JASPAR yes 101773717
chr6 43636091 43636103 TEAD1 JASPAR yes 70367106
chr6 43636091 43636103 TEAD1 JASPAR yes 101773718
chr6 43636093 43636103 TEAD1 JASPAR yes 70367107
chr6 43636093 43636103 TEAD4 JASPAR yes 70367108
chr6 43636093 43636103 TEAD1 JASPAR yes 101773719
chr6 43636093 43636103 TEAD4 JASPAR yes 101773720
chr6 43636094 43636102 TEAD3 JASPAR yes 70367109
chr6 43636094 43636102 TEAD3 JASPAR yes 101773721
chr6 43636100 43636111 E2F6 JASPAR yes 70367110
chr6 43636100 43636111 E2F6 JASPAR yes 101773722
chr6 43636102 43636110 SP1 TRANSFAC yes 70367111
chr6 43636102 43636110 SP1 TRANSFAC yes 101773723
chr6 43636104 43636110 MAZ TRANSFAC yes 70367112
chr6 43636104 43636110 MAZ TRANSFAC yes 101773724
chr6 43636104 43636115 E2F6 JASPAR yes 70367113
chr6 43636104 43636115 E2F6 JASPAR yes 101773725
chr6 43636165 43636176 E2F4 JASPAR yes 70367114
chr6 43636165 43636176 E2F6 JASPAR yes 70367115
chr6 43636165 43636176 E2F4 JASPAR yes 101773726
chr6 43636165 43636176 E2F6 JASPAR yes 101773727
chr6 43636166 43636177 E2F1 JASPAR yes 70367116
chr6 43636166 43636177 E2F1 JASPAR yes 101773728
chr6 43636170 43636181 NRF1 JASPAR yes 70367117
chr6 43636170 43636181 NRF1 JASPAR yes 101773729
chr6 43636184 43636190 NFE2 TRANSFAC yes 70367118
chr6 43636184 43636190 NFE2 TRANSFAC yes 101773730
chr6 43636185 43636197 INSM1 JASPAR yes 70367119
chr6 43636185 43636197 INSM1 JASPAR yes 101773731
chr6 43636185 43636199 GLIS2 JASPAR yes 70367120
chr6 43636185 43636199 GLIS2 JASPAR yes 101773732
chr6 43636185 43636200 ZIC4 JASPAR yes 70367121
chr6 43636185 43636200 ZIC4 JASPAR yes 101773733
chr6 43636191 43636210 CTCF JASPAR yes 70367122
chr6 43636191 43636210 CTCF JASPAR yes 101773734
chr6 43636196 43636201 SP1 TRANSFAC yes 70367123
chr6 43636196 43636201 SP1 TRANSFAC yes 101773735
chr6 43636197 43636202 SP1 TRANSFAC yes 70367124
chr6 43636197 43636202 SP1 TRANSFAC yes 101773736
chr6 43636197 43636203 SP1 TRANSFAC yes 70367125
chr6 43636197 43636203 SP1 TRANSFAC yes 101773737
chr6 43636202 43636206 LFA1 TRANSFAC yes 70367126
chr6 43636202 43636206 LFA1 TRANSFAC yes 101773738
chr6 43636210 43636214 YY1 TRANSFAC yes 70367127
chr6 43636210 43636214 YY1 TRANSFAC yes 101773739
chr6 43636238 43636254 ZNF143 JASPAR yes 70367128
chr6 43636238 43636254 ZNF143 JASPAR yes 101773740
SNP sites on vista52015[chr6:43635973-43636240]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 43636111 rs747832 G C
CTCF E2F6 POLR2A
9037644
chr6 43636129 rs148525549 G A
CTCF POLR2A
9037645
chr6 43636172 rs540909258 C G,T
CTCF E2F1 E2F4 E2F6 NRF1 POLR2A
9037646
chr6 43636178 rs75276127 C T
CTCF NRF1 POLR2A
9037647
chr6 43636236 rs543124891 T C
CTCF POLR2A
9037648
chr6 43636239 rs561263462 C T
CTCF POLR2A ZNF143
9037649
Genes possibly regulated by vista52015[chr6:43635973-43636240]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 43490072 43543812 - XPO5 ENSG00000124571.13 43543812 0.71 1.0 6619 7839
chr6 43543887 43586701 + POLH ENSG00000170734.7 43543887 0.67 1.0 6620 7914
chr6 43573053 43596899 - GTPBP2 ENSG00000172432.14 43596899 0.66 1.0 6621 60926
chr6 43597277 43608689 + MAD2L1BP ENSG00000124688.9 43597277 0.67 0.99 6622 61304
chr6 43612783 43640336 + RSPH9 ENSG00000172426.11 43612783 0.84 1.0 6623 76810
chr6 43639040 43655528 - MRPS18A ENSG00000096080.7 43655528 0.59 1.0 6624 80712
Expression level of Genes
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miRNAs possibly regulated by vista52015[chr6:43635973-43636240]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results