EnhancerDB
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  3. rs540909258[chr6:43636172]
Enhancers that have rs540909258[chr6:43636172]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43632085 43638227 enh23252
Prostate (PC-3) Esophagus Bone (Osteoblast) Placenta Thyroid Lung (PC-9) Pancreas Uterus Thymus Heart
chr6 43635973 43636240 vista52015
VISTA
Transcript factors that have rs540909258[chr6:43636172]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43634860 43638093 POLR2A UCSC Txn Factor no Conserved 108540310
chr6 43634860 43638093 POLR2A UCSC Txn Factor no Conserved 108540311
chr6 43636014 43636616 CTCF UCSC Txn Factor no Conserved 108540312
chr6 43636165 43636176 E2F4 JASPAR yes 70367114
chr6 43636165 43636176 E2F6 JASPAR yes 70367115
chr6 43636165 43636176 E2F4 JASPAR yes 101773726
chr6 43636165 43636176 E2F6 JASPAR yes 101773727
chr6 43636166 43636177 E2F1 JASPAR yes 70367116
chr6 43636166 43636177 E2F1 JASPAR yes 101773728
chr6 43636170 43636181 NRF1 JASPAR yes 70367117
chr6 43636170 43636181 NRF1 JASPAR yes 101773729
Genes associated with rs540909258[chr6:43636172], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More