EnhancerDB
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  3. vista52025[chr6:43774176-43774478]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52025[chr6:43774176-43774478]
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Tissue distribution of vista52025
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Transcription factor that possibly regulate vista52025[chr6:43774176-43774478]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 43774073 43774443 SREBP1 UCSC Txn Factor no Conserved 108540336
chr6 43774108 43774366 TFAP2C UCSC Txn Factor no Conserved 108540337
chr6 43774112 43774408 HNF4A UCSC Txn Factor no Conserved 108540338
chr6 43774173 43774346 HNF4G UCSC Txn Factor no Conserved 108540339
chr6 43774161 43774182 ZNF263 JASPAR yes 70367641
chr6 43774161 43774182 ZNF263 JASPAR yes 101786923
chr6 43774179 43774193 PLAG1 JASPAR yes 70367642
chr6 43774179 43774193 PLAG1 JASPAR yes 101786925
chr6 43774188 43774198 RELA JASPAR yes 70367643
chr6 43774188 43774198 RELA JASPAR yes 101786926
chr6 43774188 43774199 NFKB1 JASPAR yes 70367644
chr6 43774188 43774199 NFKB1 JASPAR yes 101786927
chr6 43774194 43774206 NHLH1 JASPAR yes 70367645
chr6 43774194 43774206 NHLH1 JASPAR yes 101786928
chr6 43774195 43774205 NHLH1 JASPAR yes 70367646
chr6 43774195 43774205 NHLH1 JASPAR yes 101786929
chr6 43774212 43774224 ELF1 JASPAR yes 70367647
chr6 43774212 43774224 ELF4 JASPAR yes 70367648
chr6 43774212 43774224 ELF1 JASPAR yes 101786930
chr6 43774212 43774224 ELF4 JASPAR yes 101786931
chr6 43774222 43774237 FOXP1 JASPAR yes 70367649
chr6 43774222 43774237 FOXP1 JASPAR yes 101786932
chr6 43774223 43774234 FOXP2 JASPAR yes 70367650
chr6 43774223 43774234 FOXP2 JASPAR yes 101786933
chr6 43774225 43774233 FOXO3 JASPAR yes 70367651
chr6 43774225 43774233 FOXO3 JASPAR yes 101786934
chr6 43774234 43774237 MYB TRANSFAC yes 70367652
chr6 43774234 43774237 MYB TRANSFAC yes 101786935
chr6 43774235 43774250 TFAP2A JASPAR yes 70367653
chr6 43774235 43774250 TFAP2C JASPAR yes 70367654
chr6 43774235 43774250 TFAP2A JASPAR yes 101786936
chr6 43774235 43774250 TFAP2C JASPAR yes 101786937
chr6 43774238 43774249 TFAP2A JASPAR yes 70367655
chr6 43774238 43774249 TFAP2A JASPAR yes 101786938
chr6 43774238 43774250 TFAP2A JASPAR yes 70367656
chr6 43774238 43774250 TFAP2B JASPAR yes 70367657
chr6 43774238 43774250 TFAP2C JASPAR yes 70367658
chr6 43774238 43774250 TFAP2A JASPAR yes 101786939
chr6 43774238 43774250 TFAP2B JASPAR yes 101786940
chr6 43774238 43774250 TFAP2C JASPAR yes 101786941
chr6 43774244 43774259 ESR2 JASPAR yes 70367659
chr6 43774244 43774259 HNF4G JASPAR yes 70367660
chr6 43774244 43774259 ESR2 JASPAR yes 101786942
chr6 43774244 43774259 HNF4G JASPAR yes 101786943
chr6 43774245 43774249 LFA1 TRANSFAC yes 70367661
chr6 43774245 43774249 LFA1 TRANSFAC yes 101786944
chr6 43774245 43774260 HNF4A JASPAR yes 70367662
chr6 43774245 43774260 HNF4A JASPAR yes 101786945
chr6 43774249 43774255 SOX10 JASPAR yes 70367663
chr6 43774249 43774255 SOX10 JASPAR yes 101786946
chr6 43774259 43774269 SREBF1 JASPAR yes 70367664
chr6 43774259 43774269 SREBF2 JASPAR yes 70367665
chr6 43774259 43774269 SREBF1 JASPAR yes 101786947
chr6 43774259 43774269 SREBF2 JASPAR yes 101786948
chr6 43774260 43774268 MGA JASPAR yes 70367666
chr6 43774260 43774268 MGA JASPAR yes 101786949
chr6 43774261 43774273 IRF1 JASPAR yes 70367667
chr6 43774261 43774273 IRF1 JASPAR yes 101786950
chr6 43774286 43774290 LFA1 TRANSFAC yes 70367668
chr6 43774286 43774290 LFA1 TRANSFAC yes 101786951
chr6 43774319 43774334 HNF1A JASPAR yes 70367669
chr6 43774319 43774334 HNF1A JASPAR yes 101786952
chr6 43774320 43774333 HNF1B JASPAR yes 70367670
chr6 43774320 43774333 HNF1B JASPAR yes 101786953
chr6 43774321 43774333 HNF1B JASPAR yes 70367671
chr6 43774321 43774333 HNF1B JASPAR yes 101786954
chr6 43774326 43774341 SCRT1 JASPAR yes 70367672
chr6 43774326 43774341 SCRT1 JASPAR yes 101786955
chr6 43774328 43774341 SCRT2 JASPAR yes 70367673
chr6 43774328 43774341 SCRT2 JASPAR yes 101786956
chr6 43774330 43774336 PTF TRANSFAC yes 70367674
chr6 43774330 43774336 PTF TRANSFAC yes 101786957
chr6 43774336 43774342 ESR1 TRANSFAC yes 70367675
chr6 43774336 43774342 ESR1 TRANSFAC yes 101786958
chr6 43774338 43774342 ESR1 TRANSFAC yes 70367676
chr6 43774338 43774342 ESR1 TRANSFAC yes 101786959
chr6 43774343 43774347 H1TF2 TRANSFAC yes 70367677
chr6 43774343 43774347 NFE TRANSFAC yes 70367678
chr6 43774343 43774347 SRF TRANSFAC yes 70367679
chr6 43774343 43774347 H1TF2 TRANSFAC yes 101786960
chr6 43774343 43774347 NFE TRANSFAC yes 101786961
chr6 43774343 43774347 SRF TRANSFAC yes 101786962
chr6 43774343 43774349 NFYC TRANSFAC yes 70367680
chr6 43774343 43774349 NFYC TRANSFAC yes 101786963
chr6 43774351 43774361 ID4 JASPAR yes 70367681
chr6 43774351 43774361 ID4 JASPAR yes 101786964
chr6 43774355 43774366 ESRRA JASPAR yes 70367682
chr6 43774355 43774366 ESRRA JASPAR yes 101786965
chr6 43774363 43774374 TBX20 JASPAR yes 70367683
chr6 43774363 43774374 TBX20 JASPAR yes 101786966
chr6 43774377 43774397 RREB1 JASPAR yes 70367684
chr6 43774377 43774397 RREB1 JASPAR yes 101786967
chr6 43774380 43774385 SP1 TRANSFAC yes 70367685
chr6 43774380 43774385 SP1 TRANSFAC yes 101786968
chr6 43774383 43774403 RREB1 JASPAR yes 70367686
chr6 43774383 43774403 RREB1 JASPAR yes 101786969
chr6 43774386 43774401 NR2C2 JASPAR yes 70367687
chr6 43774386 43774401 NR2C2 JASPAR yes 101786970
chr6 43774389 43774394 SP1 TRANSFAC yes 70367688
chr6 43774389 43774394 SP1 TRANSFAC yes 101786971
chr6 43774393 43774414 ZNF263 JASPAR yes 70367689
chr6 43774393 43774414 ZNF263 JASPAR yes 101786972
chr6 43774427 43774437 SP1 JASPAR yes 70367690
chr6 43774427 43774437 SP1 JASPAR yes 101786973
chr6 43774434 43774444 NFKB1 JASPAR yes 70367691
chr6 43774434 43774444 NFKB1 JASPAR yes 101786974
chr6 43774439 43774444 ETS2 TRANSFAC yes 70367692
chr6 43774439 43774444 ETS2 TRANSFAC yes 101786975
chr6 43774463 43774482 CTCF JASPAR yes 70367693
chr6 43774463 43774482 CTCF JASPAR yes 101786976
SNP sites on vista52025[chr6:43774176-43774478]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 43774212 rs556848828 G A,C
ELF1 ELF4 HNF4A HNF4G SREBP1 TFAP2C
9038917
chr6 43774301 rs542662202 G A
HNF4A HNF4G SREBP1 TFAP2C
9038918
chr6 43774400 rs6932983 G A
HNF4A NR2C2 RREB1 SREBP1 ZNF263
9038919
chr6 43774420 rs752871 C T
SREBP1
9038920
chr6 43774435 rs752872 G A
NFKB1 SP1 SREBP1
9038921
Genes possibly regulated by vista52025[chr6:43774176-43774478]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 43737921 43754224 + VEGFA ENSG00000112715.16 43737921 0.88 1.0 6625 63745
Expression level of Genes
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miRNAs possibly regulated by vista52025[chr6:43774176-43774478]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results