EnhancerDB
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  3. rs556848828[chr6:43774212]
Enhancers that have rs556848828[chr6:43774212]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43752825 43813215 enh23254
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr6 43774176 43774478 vista52025
VISTA
Transcript factors that have rs556848828[chr6:43774212]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43774073 43774443 SREBP1 UCSC Txn Factor no Conserved 108540336
chr6 43774108 43774366 TFAP2C UCSC Txn Factor no Conserved 108540337
chr6 43774112 43774408 HNF4A UCSC Txn Factor no Conserved 108540338
chr6 43774173 43774346 HNF4G UCSC Txn Factor no Conserved 108540339
chr6 43774212 43774224 ELF1 JASPAR yes 70367647
chr6 43774212 43774224 ELF4 JASPAR yes 70367648
chr6 43774212 43774224 ELF1 JASPAR yes 101786930
chr6 43774212 43774224 ELF4 JASPAR yes 101786931
Genes associated with rs556848828[chr6:43774212], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More