EnhancerDB
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  3. vista52053[chr6:44029482-44029781]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52053[chr6:44029482-44029781]
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Tissue distribution of vista52053
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Transcription factor that possibly regulate vista52053[chr6:44029482-44029781]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 44029495 44029498 MYB TRANSFAC yes 70369066
chr6 44029495 44029498 MYB TRANSFAC yes 101819199
chr6 44029503 44029507 NFE TRANSFAC yes 70369067
chr6 44029503 44029507 NFE TRANSFAC yes 101819200
chr6 44029508 44029514 LEF1 TRANSFAC yes 70369068
chr6 44029508 44029514 SOX10 JASPAR yes 70369069
chr6 44029508 44029514 LEF1 TRANSFAC yes 101819201
chr6 44029508 44029514 SOX10 JASPAR yes 101819202
chr6 44029514 44029528 SPIC JASPAR yes 70369070
chr6 44029514 44029528 SPIC JASPAR yes 101819203
chr6 44029517 44029524 SPIB JASPAR yes 70369071
chr6 44029517 44029524 SPIB JASPAR yes 101819204
chr6 44029527 44029542 FOXP1 JASPAR yes 70369072
chr6 44029527 44029542 FOXP1 JASPAR yes 101819205
chr6 44029528 44029543 FOXP1 JASPAR yes 70369073
chr6 44029528 44029543 FOXP1 JASPAR yes 101819206
chr6 44029529 44029544 FOXP1 JASPAR yes 70369074
chr6 44029529 44029544 FOXP1 JASPAR yes 101819207
chr6 44029529 44029550 IRF1 JASPAR yes 70369075
chr6 44029529 44029550 IRF1 JASPAR yes 101819208
chr6 44029530 44029545 FOXP1 JASPAR yes 70369076
chr6 44029530 44029545 FOXP1 JASPAR yes 101819209
chr6 44029530 44029551 IRF1 JASPAR yes 70369077
chr6 44029530 44029551 IRF1 JASPAR yes 101819210
chr6 44029531 44029546 FOXP1 JASPAR yes 70369078
chr6 44029531 44029546 FOXP1 JASPAR yes 101819211
chr6 44029533 44029548 FOXP1 JASPAR yes 70369079
chr6 44029533 44029548 FOXP1 JASPAR yes 101819212
chr6 44029534 44029549 STAT2 JASPAR yes 70369080
chr6 44029534 44029549 STAT2 JASPAR yes 101819213
chr6 44029535 44029550 FOXP1 JASPAR yes 70369081
chr6 44029535 44029550 FOXP1 JASPAR yes 101819214
chr6 44029535 44029556 IRF1 JASPAR yes 70369082
chr6 44029535 44029556 IRF1 JASPAR yes 101819215
chr6 44029538 44029549 FOXP2 JASPAR yes 70369083
chr6 44029538 44029549 FOXP2 JASPAR yes 101819216
chr6 44029539 44029553 SPI1 JASPAR yes 70369084
chr6 44029539 44029553 SPI1 JASPAR yes 101819217
chr6 44029560 44029575 RFX5 JASPAR yes 70369085
chr6 44029560 44029575 RFX5 JASPAR yes 101819218
chr6 44029562 44029577 STAT1 JASPAR yes 70369086
chr6 44029562 44029577 STAT1 JASPAR yes 101819219
chr6 44029564 44029575 STAT1 JASPAR yes 70369087
chr6 44029564 44029575 STAT3 JASPAR yes 70369088
chr6 44029564 44029575 STAT1 JASPAR yes 101819220
chr6 44029564 44029575 STAT3 JASPAR yes 101819221
chr6 44029569 44029574 ETS2 TRANSFAC yes 70369089
chr6 44029569 44029574 ETS2 TRANSFAC yes 101819222
chr6 44029572 44029585 DUXA JASPAR yes 70369090
chr6 44029572 44029585 DUXA JASPAR yes 101819223
chr6 44029584 44029590 ZNF354C JASPAR yes 70369091
chr6 44029584 44029590 ZNF354C JASPAR yes 101819224
chr6 44029599 44029612 SMAD2 JASPAR yes 70369092
chr6 44029599 44029612 SMAD2 JASPAR yes 101819225
chr6 44029645 44029649 YY1 TRANSFAC yes 70369093
chr6 44029645 44029649 YY1 TRANSFAC yes 101819226
chr6 44029655 44029659 NFE TRANSFAC yes 70369094
chr6 44029655 44029659 NFE TRANSFAC yes 101819227
chr6 44029658 44029667 THAP1 JASPAR yes 70369095
chr6 44029658 44029667 THAP1 JASPAR yes 101819228
chr6 44029661 44029665 LFA1 TRANSFAC yes 70369096
chr6 44029661 44029665 LFA1 TRANSFAC yes 101819229
chr6 44029668 44029673 NFY TRANSFAC yes 70369097
chr6 44029668 44029673 NFY TRANSFAC yes 101819230
chr6 44029669 44029687 NR3C1 JASPAR yes 70369098
chr6 44029669 44029687 NR3C1 JASPAR yes 101819231
chr6 44029677 44029682 GATA1 TRANSFAC yes 70369099
chr6 44029677 44029682 GATA1 TRANSFAC yes 101819232
chr6 44029689 44029703 TCF7L2 JASPAR yes 70369100
chr6 44029689 44029703 TCF7L2 JASPAR yes 101819233
chr6 44029699 44029711 TEAD1 JASPAR yes 70369101
chr6 44029699 44029711 TEAD1 JASPAR yes 101819234
chr6 44029711 44029722 FOXH1 JASPAR yes 70369102
chr6 44029711 44029722 FOXH1 JASPAR yes 101819235
chr6 44029718 44029730 TEAD1 JASPAR yes 70369103
chr6 44029718 44029730 TEAD1 JASPAR yes 101819236
chr6 44029722 44029736 JUN JASPAR yes 70369104
chr6 44029722 44029736 JUN JASPAR yes 101819237
chr6 44029725 44029736 FOSL2 JASPAR yes 70369105
chr6 44029725 44029736 JUNB JASPAR yes 70369106
chr6 44029725 44029736 FOSL2 JASPAR yes 101819238
chr6 44029725 44029736 JUNB JASPAR yes 101819239
chr6 44029726 44029737 FOS JASPAR yes 70369107
chr6 44029726 44029737 FOSL1 JASPAR yes 70369108
chr6 44029726 44029737 JUND JASPAR yes 70369109
chr6 44029726 44029737 NFE2 JASPAR yes 70369110
chr6 44029726 44029737 FOS JASPAR yes 101819240
chr6 44029726 44029737 FOSL1 JASPAR yes 101819241
chr6 44029726 44029737 JUND JASPAR yes 101819242
chr6 44029726 44029737 NFE2 JASPAR yes 101819243
chr6 44029727 44029734 JUN TRANSFAC yes 70369111
chr6 44029727 44029734 JUN TRANSFAC yes 101819244
chr6 44029727 44029736 JDP2 JASPAR yes 70369112
chr6 44029727 44029736 JDP2 JASPAR yes 101819245
chr6 44029727 44029738 FOSL2 JASPAR yes 70369113
chr6 44029727 44029738 JUNB JASPAR yes 70369114
chr6 44029727 44029738 FOSL2 JASPAR yes 101819246
chr6 44029727 44029738 JUNB JASPAR yes 101819247
chr6 44029727 44029741 JUN JASPAR yes 70369115
chr6 44029727 44029741 JUN JASPAR yes 101819248
SNP sites on vista52053[chr6:44029482-44029781]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 44029533 rs542191873 G GA
FOXP1 IRF1
9042300
chr6 44029535 rs4416671 A G
FOXP1 IRF1 STAT2
9042301
chr6 44029760 rs115581002 G C no 9042302
Genes possibly regulated by vista52053[chr6:44029482-44029781]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 43968317 43973695 + C6orf223 ENSG00000181577.11 43968317 0.93 1.0 6626 38835
chr6 44081194 44095194 - MRPL14 ENSG00000180992.5 44095194 0.74 0.99 6627 34587
chr6 44094651 44123256 + TMEM63B ENSG00000137216.14 44094651 0.81 1.0 6628 35130
chr6 44126548 44152139 + CAPN11 ENSG00000137225.8 44126548 0.96 0.96 6629 3233
Expression level of Genes
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miRNAs possibly regulated by vista52053[chr6:44029482-44029781]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results