EnhancerDB
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  3. rs4416671[chr6:44029535]
Enhancers that have rs4416671[chr6:44029535]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 44029482 44029781 vista52053
VISTA
Transcript factors that have rs4416671[chr6:44029535]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44029527 44029542 FOXP1 JASPAR yes 70369072
chr6 44029527 44029542 FOXP1 JASPAR yes 101819205
chr6 44029528 44029543 FOXP1 JASPAR yes 70369073
chr6 44029528 44029543 FOXP1 JASPAR yes 101819206
chr6 44029529 44029544 FOXP1 JASPAR yes 70369074
chr6 44029529 44029544 FOXP1 JASPAR yes 101819207
chr6 44029529 44029550 IRF1 JASPAR yes 70369075
chr6 44029529 44029550 IRF1 JASPAR yes 101819208
chr6 44029530 44029545 FOXP1 JASPAR yes 70369076
chr6 44029530 44029545 FOXP1 JASPAR yes 101819209
chr6 44029530 44029551 IRF1 JASPAR yes 70369077
chr6 44029530 44029551 IRF1 JASPAR yes 101819210
chr6 44029531 44029546 FOXP1 JASPAR yes 70369078
chr6 44029531 44029546 FOXP1 JASPAR yes 101819211
chr6 44029533 44029548 FOXP1 JASPAR yes 70369079
chr6 44029533 44029548 FOXP1 JASPAR yes 101819212
chr6 44029534 44029549 STAT2 JASPAR yes 70369080
chr6 44029534 44029549 STAT2 JASPAR yes 101819213
chr6 44029535 44029550 FOXP1 JASPAR yes 70369081
chr6 44029535 44029550 FOXP1 JASPAR yes 101819214
chr6 44029535 44029556 IRF1 JASPAR yes 70369082
chr6 44029535 44029556 IRF1 JASPAR yes 101819215
Genes associated with rs4416671[chr6:44029535], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More