EnhancerDB
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  3. vista52060[chr6:44040704-44041103]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52060[chr6:44040704-44041103]
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Tissue distribution of vista52060
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Transcription factor that possibly regulate vista52060[chr6:44040704-44041103]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 44039982 44042697 POLR2A UCSC Txn Factor no Conserved 108540407
chr6 44040533 44040772 EBF1 UCSC Txn Factor no Conserved 108540408
chr6 44040787 44041337 TCF7L2 UCSC Txn Factor no Conserved 108540409
chr6 44040791 44041135 PHF8 UCSC Txn Factor no Conserved 108540410
chr6 44040850 44041049 ZKSCAN1 UCSC Txn Factor no Conserved 108540411
chr6 44040922 44041292 E2F1 UCSC Txn Factor no Conserved 108540412
chr6 44041035 44041979 YY1 UCSC Txn Factor no Conserved 108540413
chr6 44040705 44040711 LEF1 TRANSFAC yes 70369362
chr6 44040705 44040711 SOX10 JASPAR yes 70369363
chr6 44040705 44040711 LEF1 TRANSFAC yes 101820723
chr6 44040705 44040711 SOX10 JASPAR yes 101820724
chr6 44040705 44040720 FOXP1 JASPAR yes 70369364
chr6 44040705 44040720 FOXP1 JASPAR yes 101820725
chr6 44040706 44040717 FOXP2 JASPAR yes 70369365
chr6 44040706 44040717 FOXP2 JASPAR yes 101820726
chr6 44040721 44040739 SRF JASPAR yes 70369366
chr6 44040721 44040739 SRF JASPAR yes 101820727
chr6 44040723 44040739 SRF JASPAR yes 70369367
chr6 44040723 44040739 SRF JASPAR yes 101820728
chr6 44040723 44040741 SRF JASPAR yes 70369368
chr6 44040723 44040741 SRF JASPAR yes 101820729
chr6 44040724 44040736 SRF JASPAR yes 70369369
chr6 44040724 44040736 SRF JASPAR yes 101820730
chr6 44040726 44040738 SRF JASPAR yes 70369370
chr6 44040726 44040738 SRF JASPAR yes 101820731
chr6 44040729 44040733 TEAD2 TRANSFAC yes 70369371
chr6 44040729 44040733 TEAD2 TRANSFAC yes 101820732
chr6 44040734 44040748 PLAG1 JASPAR yes 70369372
chr6 44040734 44040748 PLAG1 JASPAR yes 101820733
chr6 44040737 44040747 HOXA13 JASPAR yes 70369373
chr6 44040737 44040747 HOXB13 JASPAR yes 70369374
chr6 44040737 44040747 HOXA13 JASPAR yes 101820734
chr6 44040737 44040747 HOXB13 JASPAR yes 101820735
chr6 44040777 44040782 SP1 TRANSFAC yes 70369375
chr6 44040777 44040782 SP1 TRANSFAC yes 101820736
chr6 44040778 44040783 SP1 TRANSFAC yes 70369376
chr6 44040778 44040783 SP1 TRANSFAC yes 101820737
chr6 44040810 44040831 IRF1 JASPAR yes 70369377
chr6 44040810 44040831 IRF1 JASPAR yes 101820738
chr6 44040811 44040815 LFA1 TRANSFAC yes 70369378
chr6 44040811 44040815 LFA1 TRANSFAC yes 101820739
chr6 44040812 44040827 IRF9 JASPAR yes 70369379
chr6 44040812 44040827 IRF9 JASPAR yes 101820740
chr6 44040813 44040827 IRF7 JASPAR yes 70369380
chr6 44040813 44040827 IRF8 JASPAR yes 70369381
chr6 44040813 44040827 IRF7 JASPAR yes 101820741
chr6 44040813 44040827 IRF8 JASPAR yes 101820742
chr6 44040814 44040828 STAT1 JASPAR yes 70369382
chr6 44040814 44040828 STAT1 JASPAR yes 101820743
chr6 44040814 44040829 PRDM1 JASPAR yes 70369383
chr6 44040814 44040829 STAT2 JASPAR yes 70369384
chr6 44040814 44040829 PRDM1 JASPAR yes 101820744
chr6 44040814 44040829 STAT2 JASPAR yes 101820745
chr6 44040814 44040832 IRF2 JASPAR yes 70369385
chr6 44040814 44040832 IRF2 JASPAR yes 101820746
chr6 44040815 44040827 IRF1 JASPAR yes 70369386
chr6 44040815 44040827 IRF1 JASPAR yes 101820747
chr6 44040831 44040835 ESR1 TRANSFAC yes 70369387
chr6 44040831 44040835 ESR1 TRANSFAC yes 101820748
chr6 44040835 44040855 TP53 JASPAR yes 70369388
chr6 44040835 44040855 TP53 JASPAR yes 101820749
chr6 44040841 44040861 TP53 JASPAR yes 70369389
chr6 44040841 44040861 TP53 JASPAR yes 101820750
chr6 44040843 44040847 LFA1 TRANSFAC yes 70369390
chr6 44040843 44040847 LFA1 TRANSFAC yes 101820751
chr6 44040862 44040881 REST JASPAR yes 70369391
chr6 44040862 44040881 REST JASPAR yes 101820752
chr6 44040866 44040885 REST JASPAR yes 70369392
chr6 44040866 44040885 REST JASPAR yes 101820753
chr6 44040911 44040916 MYC TRANSFAC yes 70369393
chr6 44040911 44040916 MYC TRANSFAC yes 101820754
chr6 44040916 44040919 MYB TRANSFAC yes 70369394
chr6 44040916 44040919 MYB TRANSFAC yes 101820755
chr6 44040973 44040977 H4TF2 TRANSFAC yes 70369395
chr6 44040973 44040977 H4TF2 TRANSFAC yes 101820756
chr6 44040978 44040990 TFAP2A JASPAR yes 70369396
chr6 44040978 44040990 TFAP2A JASPAR yes 101820757
chr6 44040983 44040993 SP1 JASPAR yes 70369397
chr6 44040983 44040993 SP1 JASPAR yes 101820758
chr6 44040984 44040994 SP1 JASPAR yes 70369398
chr6 44040984 44040994 SP1 JASPAR yes 101820759
chr6 44040985 44040990 SP1 TRANSFAC yes 70369399
chr6 44040985 44040990 SP1 TRANSFAC yes 101820760
chr6 44040986 44040991 SP1 TRANSFAC yes 70369400
chr6 44040986 44040991 SP1 TRANSFAC yes 101820761
chr6 44040986 44040992 SP1 TRANSFAC yes 70369401
chr6 44040986 44040992 SP1 TRANSFAC yes 101820762
chr6 44040999 44041009 MZF1 JASPAR yes 70369402
chr6 44040999 44041009 MZF1 JASPAR yes 101820763
chr6 44041006 44041009 MYB TRANSFAC yes 70369403
chr6 44041006 44041009 MYB TRANSFAC yes 101820764
chr6 44041011 44041022 NRF1 JASPAR yes 70369404
chr6 44041011 44041022 NRF1 JASPAR yes 101820765
chr6 44041011 44041023 HINFP JASPAR yes 70369405
chr6 44041011 44041023 HINFP JASPAR yes 101820766
chr6 44041021 44041036 NR2C2 JASPAR yes 70369406
chr6 44041021 44041036 NR2C2 JASPAR yes 101820767
chr6 44041046 44041051 SP1 TRANSFAC yes 70369407
chr6 44041046 44041051 SP1 TRANSFAC yes 101820768
chr6 44041056 44041062 MZF1 JASPAR yes 70369408
chr6 44041056 44041062 MZF1 JASPAR yes 101820769
SNP sites on vista52060[chr6:44040704-44041103]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 44040892 rs76999749 G C
PHF8 POLR2A TCF7L2 ZKSCAN1
9042424
chr6 44040957 rs575276774 G C
E2F1 PHF8 POLR2A TCF7L2 ZKSCAN1
9042425
chr6 44041005 rs184732724 G A
E2F1 MZF1 PHF8 POLR2A TCF7L2 ZKSCAN1
9042426
chr6 44041014 rs112593828 G C
E2F1 HINFP NRF1 PHF8 POLR2A TCF7L2 ZKSCAN1
9042427
Genes possibly regulated by vista52060[chr6:44040704-44041103]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 43968317 43973695 + C6orf223 ENSG00000181577.11 43968317 0.93 1.0 6626 27613
chr6 44081194 44095194 - MRPL14 ENSG00000180992.5 44095194 0.74 0.99 6627 45909
chr6 44094651 44123256 + TMEM63B ENSG00000137216.14 44094651 0.81 1.0 6628 46452
chr6 44126548 44152139 + CAPN11 ENSG00000137225.8 44126548 0.96 0.96 6629 14555
Expression level of Genes
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miRNAs possibly regulated by vista52060[chr6:44040704-44041103]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results