EnhancerDB
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  3. rs112593828[chr6:44041014]
Enhancers that have rs112593828[chr6:44041014]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 44040704 44041103 vista52060
VISTA
Transcript factors that have rs112593828[chr6:44041014]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44039982 44042697 POLR2A UCSC Txn Factor no Conserved 108540407
chr6 44040787 44041337 TCF7L2 UCSC Txn Factor no Conserved 108540409
chr6 44040791 44041135 PHF8 UCSC Txn Factor no Conserved 108540410
chr6 44040850 44041049 ZKSCAN1 UCSC Txn Factor no Conserved 108540411
chr6 44040922 44041292 E2F1 UCSC Txn Factor no Conserved 108540412
chr6 44041011 44041022 NRF1 JASPAR yes 70369404
chr6 44041011 44041022 NRF1 JASPAR yes 101820765
chr6 44041011 44041023 HINFP JASPAR yes 70369405
chr6 44041011 44041023 HINFP JASPAR yes 101820766
Genes associated with rs112593828[chr6:44041014], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More