EnhancerDB
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  3. vista52199[chr6:47102503-47102708]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52199[chr6:47102503-47102708]
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Tissue distribution of vista52199
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Transcription factor that possibly regulate vista52199[chr6:47102503-47102708]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 47102378 47102818 TEAD4 UCSC Txn Factor no Conserved 108540555
chr6 47102399 47102883 ATF3 UCSC Txn Factor no Conserved 108540556
chr6 47102421 47102821 FOS UCSC Txn Factor no Conserved 108540557
chr6 47102428 47102813 EP300 UCSC Txn Factor no Conserved 108540558
chr6 47102433 47102815 TCF12 UCSC Txn Factor no Conserved 108540559
chr6 47102437 47102787 JUN UCSC Txn Factor no Conserved 108540560
chr6 47102444 47102788 JUND UCSC Txn Factor no Conserved 108540561
chr6 47102455 47102802 STAT3 UCSC Txn Factor no Conserved 108540562
chr6 47102472 47102764 FOSL2 UCSC Txn Factor no Conserved 108540563
chr6 47102472 47102796 CEBPB UCSC Txn Factor no Conserved 108540564
chr6 47102482 47102656 PRDM1 UCSC Txn Factor no Conserved 108540565
chr6 47102492 47102763 FOXA1 UCSC Txn Factor no Conserved 108540566
chr6 47102502 47102721 JUNB UCSC Txn Factor no Conserved 108540567
chr6 47102506 47102682 MEF2A UCSC Txn Factor no Conserved 108540568
chr6 47102506 47102751 FOXA2 UCSC Txn Factor no Conserved 108540569
chr6 47102502 47102507 ETS2 TRANSFAC yes 70376053
chr6 47102502 47102507 ETS2 TRANSFAC yes 102001854
chr6 47102504 47102525 ZNF263 JASPAR yes 70376054
chr6 47102504 47102525 ZNF263 JASPAR yes 102001855
chr6 47102515 47102521 SP1 TRANSFAC yes 70376055
chr6 47102515 47102521 SP1 TRANSFAC yes 102001856
chr6 47102515 47102536 ZNF263 JASPAR yes 70376056
chr6 47102515 47102536 ZNF263 JASPAR yes 102001857
chr6 47102537 47102558 IRF1 JASPAR yes 70376057
chr6 47102537 47102558 IRF1 JASPAR yes 102001858
chr6 47102539 47102554 PRDM1 JASPAR yes 70376058
chr6 47102539 47102554 PRDM1 JASPAR yes 102001859
chr6 47102559 47102577 SRF JASPAR yes 70376059
chr6 47102559 47102577 SRF JASPAR yes 102001860
chr6 47102570 47102574 ESR1 TRANSFAC yes 70376060
chr6 47102570 47102574 ESR1 TRANSFAC yes 102001861
chr6 47102587 47102598 FLI1 JASPAR yes 70376061
chr6 47102587 47102598 FLI1 JASPAR yes 102001862
chr6 47102588 47102596 FEV JASPAR yes 70376062
chr6 47102588 47102596 FEV JASPAR yes 102001863
chr6 47102589 47102603 JUN JASPAR yes 70376063
chr6 47102589 47102603 JUN JASPAR yes 102001864
chr6 47102591 47102602 BATF JASPAR yes 70376064
chr6 47102591 47102602 BATF JASPAR yes 102001865
chr6 47102592 47102603 FOSL2 JASPAR yes 70376065
chr6 47102592 47102603 JUNB JASPAR yes 70376066
chr6 47102592 47102603 FOSL2 JASPAR yes 102001866
chr6 47102592 47102603 JUNB JASPAR yes 102001867
chr6 47102593 47102604 FOS JASPAR yes 70376067
chr6 47102593 47102604 FOSL1 JASPAR yes 70376068
chr6 47102593 47102604 JUND JASPAR yes 70376069
chr6 47102593 47102604 NFE2 JASPAR yes 70376070
chr6 47102593 47102604 FOS JASPAR yes 102001868
chr6 47102593 47102604 FOSL1 JASPAR yes 102001869
chr6 47102593 47102604 JUND JASPAR yes 102001870
chr6 47102593 47102604 NFE2 JASPAR yes 102001871
chr6 47102594 47102603 JDP2 JASPAR yes 70376071
chr6 47102594 47102603 JDP2 JASPAR yes 102001872
chr6 47102594 47102605 FOSL2 JASPAR yes 70376072
chr6 47102594 47102605 JUNB JASPAR yes 70376073
chr6 47102594 47102605 FOSL2 JASPAR yes 102001873
chr6 47102594 47102605 JUNB JASPAR yes 102001874
chr6 47102594 47102608 JUN JASPAR yes 70376074
chr6 47102594 47102608 JUN JASPAR yes 102001875
chr6 47102597 47102617 TBX19 JASPAR yes 70376075
chr6 47102597 47102617 TBX19 JASPAR yes 102001876
chr6 47102599 47102607 MGA JASPAR yes 70376076
chr6 47102599 47102607 MGA JASPAR yes 102001877
chr6 47102599 47102615 T JASPAR yes 70376077
chr6 47102599 47102615 T JASPAR yes 102001878
chr6 47102610 47102614 TEAD2 TRANSFAC yes 70376078
chr6 47102610 47102614 TEAD2 TRANSFAC yes 102001879
chr6 47102610 47102615 TBP TRANSFAC yes 70376079
chr6 47102610 47102615 TBP TRANSFAC yes 102001880
chr6 47102610 47102616 TMF TRANSFAC yes 70376080
chr6 47102610 47102616 TMF TRANSFAC yes 102001881
chr6 47102619 47102634 FOXA1 JASPAR yes 70376081
chr6 47102619 47102634 FOXA1 JASPAR yes 102001882
chr6 47102622 47102633 FOXB1 JASPAR yes 70376082
chr6 47102622 47102633 FOXB1 JASPAR yes 102001883
chr6 47102640 47102648 ISL2 JASPAR yes 70376083
chr6 47102640 47102648 ISL2 JASPAR yes 102001884
chr6 47102659 47102670 HOXC13 JASPAR yes 70376084
chr6 47102659 47102670 HOXC13 JASPAR yes 102001885
chr6 47102669 47102678 NKX3-2 JASPAR yes 70376085
chr6 47102669 47102678 NKX3-2 JASPAR yes 102001886
chr6 47102681 47102686 GATA2 JASPAR yes 70376086
chr6 47102681 47102686 GATA2 JASPAR yes 102001887
chr6 47102688 47102694 HiNF-A TRANSFAC yes 70376087
chr6 47102688 47102694 HiNF-A TRANSFAC yes 102001888
chr6 47102693 47102698 ATF1 TRANSFAC yes 70376088
chr6 47102693 47102698 ATF1 TRANSFAC yes 102001889
SNP sites on vista52199[chr6:47102503-47102708]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 47102506 rs557143407 C T
ATF3 CEBPB EP300 ETS2 FOS FOSL2 FOXA1 FOXA2 JUN JUNB JUND MEF2A PRDM1 STAT3 TCF12 TEAD4 ZNF263
9059892
chr6 47102558 rs575806743 C T
ATF3 CEBPB EP300 FOS FOSL2 FOXA1 FOXA2 IRF1 JUN JUNB JUND MEF2A PRDM1 STAT3 TCF12 TEAD4
9059893
chr6 47102605 rs11758673 C T
ATF3 CEBPB EP300 FOS FOSL2 FOXA1 FOXA2 JUN JUNB JUND MEF2A MGA PRDM1 STAT3 T TBX19 TCF12 TEAD4
9059894
chr6 47102612 rs528801140 A G
ATF3 CEBPB EP300 FOS FOSL2 FOXA1 FOXA2 JUN JUNB JUND MEF2A PRDM1 STAT3 T TBP TBX19 TCF12 TEAD2 TEAD4 TMF
9059895
chr6 47102660 rs146966033 G A
ATF3 CEBPB EP300 FOS FOSL2 FOXA1 FOXA2 HOXC13 JUN JUNB JUND MEF2A STAT3 TCF12 TEAD4
9059896
chr6 47102669 rs186292816 G A
ATF3 CEBPB EP300 FOS FOSL2 FOXA1 FOXA2 HOXC13 JUN JUNB JUND MEF2A NKX3-2 STAT3 TCF12 TEAD4
9059897
Genes possibly regulated by vista52199[chr6:47102503-47102708]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 46965440 47010099 - GPR110 ENSG00000153292.11 47010099 0.96 1.0 6654 7596
Expression level of Genes
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miRNAs possibly regulated by vista52199[chr6:47102503-47102708]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results