EnhancerDB
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  3. rs575806743[chr6:47102558]
Enhancers that have rs575806743[chr6:47102558]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47092105 47126155 enh23288
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 47102503 47102708 vista52199
VISTA
Transcript factors that have rs575806743[chr6:47102558]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47102378 47102818 TEAD4 UCSC Txn Factor no Conserved 108540555
chr6 47102399 47102883 ATF3 UCSC Txn Factor no Conserved 108540556
chr6 47102421 47102821 FOS UCSC Txn Factor no Conserved 108540557
chr6 47102428 47102813 EP300 UCSC Txn Factor no Conserved 108540558
chr6 47102433 47102815 TCF12 UCSC Txn Factor no Conserved 108540559
chr6 47102437 47102787 JUN UCSC Txn Factor no Conserved 108540560
chr6 47102444 47102788 JUND UCSC Txn Factor no Conserved 108540561
chr6 47102455 47102802 STAT3 UCSC Txn Factor no Conserved 108540562
chr6 47102472 47102764 FOSL2 UCSC Txn Factor no Conserved 108540563
chr6 47102472 47102796 CEBPB UCSC Txn Factor no Conserved 108540564
chr6 47102482 47102656 PRDM1 UCSC Txn Factor no Conserved 108540565
chr6 47102492 47102763 FOXA1 UCSC Txn Factor no Conserved 108540566
chr6 47102502 47102721 JUNB UCSC Txn Factor no Conserved 108540567
chr6 47102506 47102682 MEF2A UCSC Txn Factor no Conserved 108540568
chr6 47102506 47102751 FOXA2 UCSC Txn Factor no Conserved 108540569
chr6 47102537 47102558 IRF1 JASPAR yes 70376057
chr6 47102537 47102558 IRF1 JASPAR yes 102001858
Genes associated with rs575806743[chr6:47102558], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More