EnhancerDB
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  3. vista5227[chr1:222011312-222011511]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5227[chr1:222011312-222011511]
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Tissue distribution of vista5227
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Transcription factor that possibly regulate vista5227[chr1:222011312-222011511]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 222011332 222011340 OTX1 JASPAR yes 35573695
chr1 222011332 222011340 OTX2 JASPAR yes 35573696
chr1 222011332 222011340 OTX1 JASPAR yes 118465115
chr1 222011332 222011340 OTX2 JASPAR yes 118465116
chr1 222011345 222011350 SP1 TRANSFAC yes 35573697
chr1 222011345 222011350 SP1 TRANSFAC yes 118465117
chr1 222011361 222011372 NRF1 JASPAR yes 35573698
chr1 222011361 222011372 NRF1 JASPAR yes 118465118
chr1 222011373 222011388 RUNX2 JASPAR yes 35573699
chr1 222011373 222011388 RUNX2 JASPAR yes 118465119
chr1 222011374 222011385 RUNX1 JASPAR yes 35573700
chr1 222011374 222011385 RUNX1 JASPAR yes 118465120
chr1 222011417 222011424 NKX3-1 JASPAR yes 35573701
chr1 222011417 222011424 NKX3-1 JASPAR yes 118465121
chr1 222011434 222011449 STAT2 JASPAR yes 35573702
chr1 222011434 222011449 STAT2 JASPAR yes 118465122
chr1 222011436 222011454 IRF2 JASPAR yes 35573703
chr1 222011436 222011454 IRF2 JASPAR yes 118465123
chr1 222011437 222011458 IRF1 JASPAR yes 35573704
chr1 222011437 222011458 IRF1 JASPAR yes 118465124
chr1 222011439 222011444 ETS2 TRANSFAC yes 35573705
chr1 222011439 222011444 ETS2 TRANSFAC yes 118465125
chr1 222011441 222011453 IRF1 JASPAR yes 35573706
chr1 222011441 222011453 IRF1 JASPAR yes 118465126
chr1 222011446 222011461 HNF1A JASPAR yes 35573707
chr1 222011446 222011461 HNF1A JASPAR yes 118465127
chr1 222011447 222011461 ONECUT3 JASPAR yes 35573708
chr1 222011447 222011461 ONECUT3 JASPAR yes 118465128
chr1 222011448 222011459 BATF JASPAR yes 35573709
chr1 222011448 222011459 BATF JASPAR yes 118465129
chr1 222011450 222011464 POU4F1 JASPAR yes 35573710
chr1 222011450 222011464 POU4F1 JASPAR yes 118465130
chr1 222011450 222011466 POU4F2 JASPAR yes 35573711
chr1 222011450 222011466 POU4F3 JASPAR yes 35573712
chr1 222011450 222011466 POU4F2 JASPAR yes 118465131
chr1 222011450 222011466 POU4F3 JASPAR yes 118465132
chr1 222011453 222011457 YY1 TRANSFAC yes 35573713
chr1 222011453 222011457 YY1 TRANSFAC yes 118465133
SNP sites on vista5227[chr1:222011312-222011511]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 222011438 rs539862752 G A
IRF1 IRF2 STAT2
968732
Genes possibly regulated by vista5227[chr1:222011312-222011511]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 221874766 221915518 - DUSP10 ENSG00000143507.13 221915518 0.73 0.99 1863 4206
Expression level of Genes
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miRNAs possibly regulated by vista5227[chr1:222011312-222011511]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results