EnhancerDB
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  3. vista5272[chr1:223903033-223903347]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5272[chr1:223903033-223903347]
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Tissue distribution of vista5272
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Transcription factor that possibly regulate vista5272[chr1:223903033-223903347]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 223902588 223903301 ZNF263 UCSC Txn Factor no Conserved 107873043
chr1 223902971 223903347 TCF7L2 UCSC Txn Factor no Conserved 107873059
chr1 223902978 223903276 FOS UCSC Txn Factor no Conserved 107873062
chr1 223902997 223903281 GATA2 UCSC Txn Factor no Conserved 107873069
chr1 223903124 223903401 CEBPB UCSC Txn Factor no Conserved 107873089
chr1 223903023 223903044 ZNF263 JASPAR yes 35671551
chr1 223903023 223903044 ZNF263 JASPAR yes 118466729
chr1 223903051 223903066 HNF4A JASPAR yes 35671552
chr1 223903051 223903066 HNF4A JASPAR yes 118466730
chr1 223903066 223903081 FOXP1 JASPAR yes 35671553
chr1 223903066 223903081 FOXP1 JASPAR yes 118466731
chr1 223903067 223903078 FOXP2 JASPAR yes 35671554
chr1 223903067 223903078 FOXP2 JASPAR yes 118466732
chr1 223903070 223903083 POU2F2 JASPAR yes 35671555
chr1 223903070 223903083 POU2F2 JASPAR yes 118466733
chr1 223903083 223903098 AR JASPAR yes 35671556
chr1 223903083 223903098 AR JASPAR yes 118466734
chr1 223903096 223903105 JDP2 JASPAR yes 35671557
chr1 223903096 223903105 JDP2 JASPAR yes 118466735
chr1 223903100 223903110 NEUROG2 JASPAR yes 35671558
chr1 223903100 223903110 NEUROG2 JASPAR yes 118466736
chr1 223903109 223903115 JUN TRANSFAC yes 35671559
chr1 223903109 223903115 JUN TRANSFAC yes 118466737
chr1 223903113 223903126 ELF1 JASPAR yes 35671560
chr1 223903113 223903126 ELF1 JASPAR yes 118466738
chr1 223903114 223903126 EHF JASPAR yes 35671561
chr1 223903114 223903126 EHF JASPAR yes 118466739
chr1 223903114 223903127 ELF3 JASPAR yes 35671562
chr1 223903114 223903127 ELF3 JASPAR yes 118466740
chr1 223903115 223903126 ELF5 JASPAR yes 35671563
chr1 223903115 223903126 ELF5 JASPAR yes 118466741
chr1 223903116 223903123 ETS1 TRANSFAC yes 35671564
chr1 223903116 223903123 ETS1 TRANSFAC yes 118466742
chr1 223903125 223903135 GSC2 JASPAR yes 35671565
chr1 223903125 223903135 GSC JASPAR yes 35671566
chr1 223903125 223903135 GSC2 JASPAR yes 118466743
chr1 223903125 223903135 GSC JASPAR yes 118466744
chr1 223903126 223903134 OTX1 JASPAR yes 35671567
chr1 223903126 223903134 OTX2 JASPAR yes 35671568
chr1 223903126 223903134 RHOXF1 JASPAR yes 35671569
chr1 223903126 223903134 OTX1 JASPAR yes 118466745
chr1 223903126 223903134 OTX2 JASPAR yes 118466746
chr1 223903126 223903134 RHOXF1 JASPAR yes 118466747
chr1 223903126 223903135 PITX3 JASPAR yes 35671570
chr1 223903126 223903135 PITX3 JASPAR yes 118466748
chr1 223903134 223903142 GATA3 JASPAR yes 35671571
chr1 223903134 223903142 GATA3 JASPAR yes 118466749
chr1 223903145 223903151 MAZ TRANSFAC yes 35671572
chr1 223903145 223903151 MAZ TRANSFAC yes 118466750
chr1 223903151 223903155 LFA1 TRANSFAC yes 35671573
chr1 223903151 223903155 LFA1 TRANSFAC yes 118466751
chr1 223903151 223903165 STAT1 JASPAR yes 35671574
chr1 223903151 223903165 STAT1 JASPAR yes 118466752
chr1 223903166 223903181 TFAP2C JASPAR yes 35671575
chr1 223903166 223903181 TFAP2C JASPAR yes 118466753
chr1 223903171 223903181 ETV6 JASPAR yes 35671576
chr1 223903171 223903181 ETV6 JASPAR yes 118466754
chr1 223903171 223903182 FLI1 JASPAR yes 35671577
chr1 223903171 223903182 FLI1 JASPAR yes 118466755
chr1 223903172 223903180 EHF JASPAR yes 35671578
chr1 223903172 223903180 EHF JASPAR yes 118466756
chr1 223903173 223903180 SPI1 JASPAR yes 35671579
chr1 223903173 223903180 SPI1 JASPAR yes 118466757
chr1 223903173 223903188 PRDM1 JASPAR yes 35671580
chr1 223903173 223903188 PRDM1 JASPAR yes 118466758
chr1 223903188 223903205 RXRA JASPAR yes 35671581
chr1 223903188 223903205 RXRA JASPAR yes 118466759
chr1 223903189 223903210 ZNF263 JASPAR yes 35671582
chr1 223903189 223903210 ZNF263 JASPAR yes 118466760
chr1 223903192 223903201 THAP1 JASPAR yes 35671583
chr1 223903192 223903201 THAP1 JASPAR yes 118466761
chr1 223903193 223903203 SP1 JASPAR yes 35671584
chr1 223903193 223903203 SP1 JASPAR yes 118466762
chr1 223903195 223903199 LFA1 TRANSFAC yes 35671585
chr1 223903195 223903199 LFA1 TRANSFAC yes 118466763
chr1 223903199 223903209 SP1 JASPAR yes 35671586
chr1 223903199 223903209 SP1 JASPAR yes 118466764
chr1 223903200 223903209 SP1 TRANSFAC yes 35671587
chr1 223903200 223903209 SP1 TRANSFAC yes 118466765
chr1 223903201 223903207 MAZ TRANSFAC yes 35671588
chr1 223903201 223903207 MAZ TRANSFAC yes 118466766
chr1 223903220 223903239 CTCF JASPAR yes 35671589
chr1 223903220 223903239 CTCF JASPAR yes 118466767
chr1 223903256 223903261 H4TF1 TRANSFAC yes 35671590
chr1 223903256 223903261 H4TF1 TRANSFAC yes 118466768
chr1 223903256 223903267 CEBPB JASPAR yes 35671591
chr1 223903256 223903267 CEBPB JASPAR yes 118466769
chr1 223903257 223903267 CEBPB JASPAR yes 35671592
chr1 223903257 223903267 CEBPD JASPAR yes 35671593
chr1 223903257 223903267 CEBPE JASPAR yes 35671594
chr1 223903257 223903267 CEBPB JASPAR yes 118466770
chr1 223903257 223903267 CEBPD JASPAR yes 118466771
chr1 223903257 223903267 CEBPE JASPAR yes 118466772
chr1 223903257 223903268 CEBPA JASPAR yes 35671595
chr1 223903257 223903268 CEBPA JASPAR yes 118466773
chr1 223903286 223903301 TFAP2C JASPAR yes 35671596
chr1 223903286 223903301 TFAP2C JASPAR yes 118466774
chr1 223903297 223903307 GSC2 JASPAR yes 35671597
chr1 223903297 223903307 GSC JASPAR yes 35671598
chr1 223903297 223903307 GSC2 JASPAR yes 118466775
chr1 223903297 223903307 GSC JASPAR yes 118466776
chr1 223903298 223903306 OTX1 JASPAR yes 35671599
chr1 223903298 223903306 OTX2 JASPAR yes 35671600
chr1 223903298 223903306 RHOXF1 JASPAR yes 35671601
chr1 223903298 223903306 OTX1 JASPAR yes 118466777
chr1 223903298 223903306 OTX2 JASPAR yes 118466778
chr1 223903298 223903306 RHOXF1 JASPAR yes 118466779
chr1 223903298 223903307 PITX3 JASPAR yes 35671602
chr1 223903298 223903307 PITX3 JASPAR yes 118466780
chr1 223903321 223903336 HNF4G JASPAR yes 35671603
chr1 223903321 223903336 HNF4G JASPAR yes 118466781
chr1 223903322 223903336 NR2F1 JASPAR yes 35671604
chr1 223903322 223903336 NR2F1 JASPAR yes 118466782
chr1 223903322 223903337 HNF4A JASPAR yes 35671605
chr1 223903322 223903337 HNF4A JASPAR yes 118466783
chr1 223903323 223903327 H4TF2 TRANSFAC yes 35671606
chr1 223903323 223903327 H4TF2 TRANSFAC yes 118466784
SNP sites on vista5272[chr1:223903033-223903347]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 223903151 rs116505493 G C
CEBPB FOS GATA2 LFA1 MAZ STAT1 TCF7L2 ZNF263
978242
chr1 223903167 rs28370014 A G
CEBPB FOS GATA2 TCF7L2 TFAP2C ZNF263
978243
chr1 223903202 rs12032206 G C
CEBPB FOS GATA2 MAZ RXRA SP1 TCF7L2 ZNF263
978244
chr1 223903233 rs372590654 G A
CEBPB CTCF FOS GATA2 TCF7L2 ZNF263
978245
chr1 223903297 rs377245469 C T
CEBPB GSC GSC2 TCF7L2 TFAP2C ZNF263
978246
chr1 223903301 rs28370016 GA G
CEBPB GSC GSC2 OTX1 OTX2 PITX3 RHOXF1 TCF7L2 TFAP2C ZNF263
978247
Genes possibly regulated by vista5272[chr1:223903033-223903347]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 223711349 223853436 - CAPN8 ENSG00000203697.7 223853436 0.92 0.99 1874 50403
chr1 223889295 223963720 + CAPN2 ENSG00000162909.13 223889295 0.77 1.0 1875 86262
Expression level of Genes
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miRNAs possibly regulated by vista5272[chr1:223903033-223903347]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results