EnhancerDB
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  3. rs28370016[chr1:223903301]
Enhancers that have rs28370016[chr1:223903301]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 223903033 223903347 vista5272
VISTA
Transcript factors that have rs28370016[chr1:223903301]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223902588 223903301 ZNF263 UCSC Txn Factor no Conserved 107873043
chr1 223902896 223903556 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383865
chr1 223902896 223903556 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873046
chr1 223902899 223903355 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21383866
chr1 223902899 223903355 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107873047
chr1 223902920 223903330 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107873048
chr1 223902925 223903369 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21383867
chr1 223902925 223903369 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107873049
chr1 223902942 223903406 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383870
chr1 223902942 223903406 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873052
chr1 223902949 223903405 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383871
chr1 223902949 223903405 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873053
chr1 223902951 223903347 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383872
chr1 223902951 223903347 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873054
chr1 223902956 223903360 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383873
chr1 223902956 223903360 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873055
chr1 223902959 223903319 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21383874
chr1 223902959 223903319 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107873056
chr1 223902971 223903347 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21383877
chr1 223902971 223903347 TCF7L2 UCSC Txn Factor no Conserved 107873059
chr1 223902971 223903347 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107873060
chr1 223902982 223903366 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383879
chr1 223902982 223903366 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873063
chr1 223902988 223903318 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383881
chr1 223902988 223903318 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873065
chr1 223902989 223903319 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383882
chr1 223902989 223903319 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873066
chr1 223902991 223903507 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383883
chr1 223902991 223903507 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873067
chr1 223902992 223903362 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21383884
chr1 223902992 223903362 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107873068
chr1 223903004 223903374 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383886
chr1 223903004 223903374 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873071
chr1 223903007 223903471 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21383887
chr1 223903007 223903471 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107873072
chr1 223903016 223903546 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383888
chr1 223903016 223903546 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873073
chr1 223903021 223903421 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21383890
chr1 223903021 223903421 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107873075
chr1 223903025 223903429 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21383893
chr1 223903025 223903429 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107873078
chr1 223903036 223903312 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21383895
chr1 223903036 223903312 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107873080
chr1 223903066 223903746 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383896
chr1 223903066 223903746 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873081
chr1 223903073 223903723 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383897
chr1 223903073 223903723 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873082
chr1 223903079 223903309 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21383898
chr1 223903079 223903309 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107873083
chr1 223903082 223903312 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21383899
chr1 223903082 223903312 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107873084
chr1 223903089 223903349 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383900
chr1 223903089 223903349 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873085
chr1 223903124 223903354 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383902
chr1 223903124 223903354 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873087
chr1 223903124 223903380 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107873088
chr1 223903124 223903401 CEBPB UCSC Txn Factor no Conserved 107873089
chr1 223903125 223903315 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21383903
chr1 223903125 223903315 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107873090
chr1 223903127 223903377 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383904
chr1 223903127 223903377 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873091
chr1 223903134 223903406 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383906
chr1 223903134 223903406 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873093
chr1 223903136 223903352 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107873094
chr1 223903137 223903401 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107873095
chr1 223903146 223903322 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21383907
chr1 223903146 223903322 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107873096
chr1 223903178 223903348 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21383908
chr1 223903178 223903348 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107873097
chr1 223903194 223903704 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383909
chr1 223903194 223903704 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873098
chr1 223903196 223903712 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383910
chr1 223903196 223903712 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873099
chr1 223903286 223903301 TFAP2C JASPAR yes 35671596
chr1 223903286 223903301 TFAP2C JASPAR yes 118466774
chr1 223903297 223903307 GSC2 JASPAR yes 35671597
chr1 223903297 223903307 GSC JASPAR yes 35671598
chr1 223903297 223903307 GSC2 JASPAR yes 118466775
chr1 223903297 223903307 GSC JASPAR yes 118466776
chr1 223903298 223903306 OTX1 JASPAR yes 35671599
chr1 223903298 223903306 OTX2 JASPAR yes 35671600
chr1 223903298 223903306 RHOXF1 JASPAR yes 35671601
chr1 223903298 223903306 OTX1 JASPAR yes 118466777
chr1 223903298 223903306 OTX2 JASPAR yes 118466778
chr1 223903298 223903306 RHOXF1 JASPAR yes 118466779
chr1 223903298 223903307 PITX3 JASPAR yes 35671602
chr1 223903298 223903307 PITX3 JASPAR yes 118466780
Genes associated with rs28370016[chr1:223903301], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More