EnhancerDB
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  3. vista5299[chr1:224635065-224635439]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5299[chr1:224635065-224635439]
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Tissue distribution of vista5299
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Transcription factor that possibly regulate vista5299[chr1:224635065-224635439]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 224635045 224635066 ZNF263 JASPAR yes 35703236
chr1 224635045 224635066 ZNF263 JASPAR yes 118468284
chr1 224635080 224635087 SPIB JASPAR yes 35703238
chr1 224635080 224635087 SPIB JASPAR yes 118468285
chr1 224635081 224635089 FEV JASPAR yes 35703239
chr1 224635081 224635089 FEV JASPAR yes 118468286
chr1 224635090 224635111 IRF1 JASPAR yes 35703240
chr1 224635090 224635111 IRF1 JASPAR yes 118468287
chr1 224635104 224635110 TCF4 TRANSFAC yes 35703241
chr1 224635104 224635110 TCF4 TRANSFAC yes 118468288
chr1 224635111 224635115 NFE TRANSFAC yes 35703242
chr1 224635111 224635115 NFE TRANSFAC yes 118468289
chr1 224635111 224635116 GATA1 TRANSFAC yes 35703243
chr1 224635111 224635116 GATA1 TRANSFAC yes 118468290
chr1 224635111 224635117 GATA3 JASPAR yes 35703244
chr1 224635111 224635117 GATA3 JASPAR yes 118468291
chr1 224635116 224635130 TLX1 JASPAR yes 35703245
chr1 224635116 224635130 TLX1 JASPAR yes 118468292
chr1 224635128 224635133 MYC TRANSFAC yes 35703246
chr1 224635128 224635133 MYC TRANSFAC yes 118468293
chr1 224635138 224635147 HIC2 JASPAR yes 35703247
chr1 224635138 224635147 HIC2 JASPAR yes 118468294
chr1 224635140 224635147 SP1 TRANSFAC yes 35703248
chr1 224635140 224635147 SP1 TRANSFAC yes 118468295
chr1 224635142 224635147 SP1 TRANSFAC yes 35703249
chr1 224635142 224635147 SP1 TRANSFAC yes 118468296
chr1 224635142 224635154 GLI2 JASPAR yes 35703250
chr1 224635142 224635154 GLI2 JASPAR yes 118468297
chr1 224635153 224635163 SP1 JASPAR yes 35703251
chr1 224635153 224635163 SP1 JASPAR yes 118468298
chr1 224635156 224635161 SP1 TRANSFAC yes 35703252
chr1 224635156 224635161 SP1 TRANSFAC yes 118468299
chr1 224635158 224635171 NFKB2 JASPAR yes 35703253
chr1 224635158 224635171 NFKB2 JASPAR yes 118468300
chr1 224635158 224635176 ESR1 JASPAR yes 35703254
chr1 224635158 224635176 ESR1 JASPAR yes 118468301
chr1 224635159 224635170 NFKB1 JASPAR yes 35703255
chr1 224635159 224635170 NFKB1 JASPAR yes 118468302
chr1 224635165 224635171 MZF1 JASPAR yes 35703256
chr1 224635165 224635171 MZF1 JASPAR yes 118468303
chr1 224635179 224635190 FOS JASPAR yes 35703257
chr1 224635179 224635190 FOSL1 JASPAR yes 35703258
chr1 224635179 224635190 JUND JASPAR yes 35703259
chr1 224635179 224635190 FOS JASPAR yes 118468304
chr1 224635179 224635190 FOSL1 JASPAR yes 118468305
chr1 224635179 224635190 JUND JASPAR yes 118468306
chr1 224635180 224635191 FOSL2 JASPAR yes 35703260
chr1 224635180 224635191 JUNB JASPAR yes 35703261
chr1 224635180 224635191 FOSL2 JASPAR yes 118468307
chr1 224635180 224635191 JUNB JASPAR yes 118468308
chr1 224635180 224635194 JUN JASPAR yes 35703262
chr1 224635180 224635194 JUN JASPAR yes 118468309
chr1 224635204 224635221 BCL6B JASPAR yes 35703263
chr1 224635204 224635221 BCL6B JASPAR yes 118468310
chr1 224635252 224635257 ETS2 TRANSFAC yes 35703264
chr1 224635252 224635257 ETS2 TRANSFAC yes 118468311
chr1 224635255 224635264 PITX3 JASPAR yes 35703265
chr1 224635255 224635264 PITX3 JASPAR yes 118468312
chr1 224635256 224635264 RHOXF1 JASPAR yes 35703266
chr1 224635256 224635264 RHOXF1 JASPAR yes 118468313
chr1 224635268 224635277 HIC2 JASPAR yes 35703267
chr1 224635268 224635277 HIC2 JASPAR yes 118468314
chr1 224635268 224635278 NFIA JASPAR yes 35703268
chr1 224635268 224635278 NFIA JASPAR yes 118468315
chr1 224635269 224635278 NFIX JASPAR yes 35703269
chr1 224635269 224635278 NFIX JASPAR yes 118468316
chr1 224635270 224635276 NFIC JASPAR yes 35703270
chr1 224635270 224635276 NFIC JASPAR yes 118468317
chr1 224635275 224635290 MEF2A JASPAR yes 35703271
chr1 224635275 224635290 MEF2A JASPAR yes 118468318
chr1 224635276 224635288 MEF2A JASPAR yes 35703272
chr1 224635276 224635288 MEF2B JASPAR yes 35703273
chr1 224635276 224635288 MEF2D JASPAR yes 35703274
chr1 224635276 224635288 MEF2A JASPAR yes 118468319
chr1 224635276 224635288 MEF2B JASPAR yes 118468320
chr1 224635276 224635288 MEF2D JASPAR yes 118468321
chr1 224635277 224635287 MEF2A JASPAR yes 35703275
chr1 224635277 224635287 MEF2A JASPAR yes 118468322
chr1 224635284 224635287 MYB TRANSFAC yes 35703276
chr1 224635284 224635287 MYB TRANSFAC yes 118468323
chr1 224635331 224635346 LEF1 JASPAR yes 35703277
chr1 224635331 224635346 LEF1 JASPAR yes 118468324
chr1 224635332 224635346 TCF7L2 JASPAR yes 35703278
chr1 224635332 224635346 TCF7L2 JASPAR yes 118468325
chr1 224635334 224635341 TCF4 TRANSFAC yes 35703279
chr1 224635334 224635341 TCF4 TRANSFAC yes 118468326
chr1 224635335 224635341 LEF1 TRANSFAC yes 35703280
chr1 224635335 224635341 TCF4 TRANSFAC yes 35703281
chr1 224635335 224635341 LEF1 TRANSFAC yes 118468327
chr1 224635335 224635341 TCF4 TRANSFAC yes 118468328
chr1 224635350 224635356 SOX10 JASPAR yes 35703282
chr1 224635350 224635356 SOX10 JASPAR yes 118468329
chr1 224635357 224635361 LFA1 TRANSFAC yes 35703283
chr1 224635357 224635361 LFA1 TRANSFAC yes 118468330
chr1 224635375 224635386 HOXA10 JASPAR yes 35703284
chr1 224635375 224635386 HOXA10 JASPAR yes 118468331
chr1 224635376 224635385 CDX1 JASPAR yes 35703285
chr1 224635376 224635385 CDX1 JASPAR yes 118468332
chr1 224635384 224635403 RFX2 JASPAR yes 35703286
chr1 224635384 224635403 RFX2 JASPAR yes 118468333
chr1 224635388 224635404 RFX2 JASPAR yes 35703287
chr1 224635388 224635404 RFX3 JASPAR yes 35703288
chr1 224635388 224635404 RFX4 JASPAR yes 35703289
chr1 224635388 224635404 RFX5 JASPAR yes 35703290
chr1 224635388 224635404 RFX2 JASPAR yes 118468334
chr1 224635388 224635404 RFX3 JASPAR yes 118468335
chr1 224635388 224635404 RFX4 JASPAR yes 118468336
chr1 224635388 224635404 RFX5 JASPAR yes 118468337
chr1 224635389 224635408 RFX2 JASPAR yes 35703291
chr1 224635389 224635408 RFX2 JASPAR yes 118468338
chr1 224635394 224635403 NFIX JASPAR yes 35703292
chr1 224635394 224635403 NFIX JASPAR yes 118468339
chr1 224635395 224635401 NFIC JASPAR yes 35703293
chr1 224635395 224635401 NFIC JASPAR yes 118468340
chr1 224635410 224635422 ZBTB7B JASPAR yes 35703294
chr1 224635410 224635422 ZBTB7C JASPAR yes 35703295
chr1 224635410 224635422 ZBTB7B JASPAR yes 118468341
chr1 224635410 224635422 ZBTB7C JASPAR yes 118468342
chr1 224635426 224635432 MZF1 JASPAR yes 35703296
chr1 224635426 224635432 MZF1 JASPAR yes 118468343
SNP sites on vista5299[chr1:224635065-224635439]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 224635124 rs570390049 C T
TLX1
981713
chr1 224635244 rs546402729 A T no 981714
chr1 224635426 rs117474970 G A
MZF1
981715
chr1 224635435 rs75768000 G A no 981716
Genes possibly regulated by vista5299[chr1:224635065-224635439]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 224544552 224567161 + CNIH4 ENSG00000143771.7 224544552 0.76 1.0 1881 9487
chr1 224572845 224624735 - WDR26 ENSG00000162923.10 224624735 0.74 1.0 1882 89670
chr1 224622362 224928251 + CNIH3 ENSG00000143786.3 224622362 0.86 1.0 1883 87297
Expression level of Genes
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miRNAs possibly regulated by vista5299[chr1:224635065-224635439]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results