EnhancerDB
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  3. rs570390049[chr1:224635124]
Enhancers that have rs570390049[chr1:224635124]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224633023 224649015 enh12718
Bone Marrow (K562) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 224635065 224635439 vista5299
VISTA
Transcript factors that have rs570390049[chr1:224635124]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224634689 224635141 ZNF274 GTRD no Liver (HepG2) 21384365
chr1 224634689 224635141 ZNF274 GTRD no Liver (HepG2) 107873755
chr1 224634926 224635905 ZNF274 GTRD no Bone Marrow (K562) 21384367
chr1 224634926 224635905 ZNF274 GTRD no Bone Marrow (K562) 107873757
chr1 224635008 224635823 ZBTB33 GTRD no Brain (SK-N-SH) 21384368
chr1 224635008 224635823 ZBTB33 GTRD no Brain (SK-N-SH) 107873758
chr1 224635116 224635130 TLX1 JASPAR yes 35703245
chr1 224635116 224635130 TLX1 JASPAR yes 118468292
Genes associated with rs570390049[chr1:224635124], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More